RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 HLA-DQA1Q5Y7H0 255 aa20.72■□□□□ 0.91
BPTF-208ENST00000544778 OSBPL8Q9BZF1 889 aa20.72■□□□□ 0.91
BPTF-208ENST00000544778 H7C1W4 665 aa20.72■□□□□ 0.91
BPTF-208ENST00000544778 CDH16O75309 829 aa20.72■□□□□ 0.91
BPTF-208ENST00000544778 MAP3K6O95382 1288 aa20.72■□□□□ 0.91
BPTF-208ENST00000544778 EPC2Q52LR7 807 aa20.72■□□□□ 0.91
BPTF-208ENST00000544778 SLC2A3P11169 496 aa20.72■□□□□ 0.91
BPTF-208ENST00000544778 MYL4P12829 197 aa20.72■□□□□ 0.91
BPTF-208ENST00000544778 TALDO1P37837 337 aa20.72■□□□□ 0.91
BPTF-208ENST00000544778 GLRBP48167 497 aa20.72■□□□□ 0.91
BPTF-208ENST00000544778 MMRN1Q13201 1228 aa20.72■□□□□ 0.91
BPTF-208ENST00000544778 TERF2Q15554 542 aa20.72■□□□□ 0.91
BPTF-208ENST00000544778 TLK2Q86UE8 772 aa20.72■□□□□ 0.91
BPTF-208ENST00000544778 HERC6Q8IVU3 1022 aa20.72■□□□□ 0.91
BPTF-208ENST00000544778 KLHL1Q9NR64 748 aa20.72■□□□□ 0.91
BPTF-208ENST00000544778 ATP2C1P98194 919 aaPredicted RBP20.71■□□□□ 0.91
BPTF-208ENST00000544778 SRBD1Q8N5C6 995 aaKnown RBP20.71■□□□□ 0.91
BPTF-208ENST00000544778 RRN3P2A6NIE6 340 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 NR5A2O00482 541 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 B3GAT3O94766 335 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 CNPP09543 421 aaKnown RBP20.71■□□□□ 0.91
BPTF-208ENST00000544778 R3HDM1Q15032 1099 aaKnown RBP20.71■□□□□ 0.91
BPTF-208ENST00000544778 DENND1BQ6P3S1 775 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 RSPH1Q8WYR4 309 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 VPS28Q9UK41 221 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 SMIM31A0A1B0GVY4 71 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 FAM45BPQ6NSW5 357 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 SETD3Q86TU7 594 aaPredicted RBP20.71■□□□□ 0.91
BPTF-208ENST00000544778 FMR1NBQ8N0W7 255 aaPredicted RBP20.71■□□□□ 0.91
BPTF-208ENST00000544778 OR2W6PQ8NHA6 318 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 LPAR1Q92633 364 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 NLNQ9BYT8 704 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 RSPH9Q9H1X1 276 aaPredicted RBP20.71■□□□□ 0.91
BPTF-208ENST00000544778 CHORDC1Q9UHD1 332 aaPredicted RBP20.71■□□□□ 0.91
BPTF-208ENST00000544778 MTSS1O43312 755 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 TRIM16LQ309B1 348 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 UGGT1Q9NYU2 1555 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 PLA2G6O60733 806 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 ITGB6P18564 788 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 FGFR2P21802 821 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 EPHB3P54753 998 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 SNX30Q5VWJ9 437 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 TRMT11Q7Z4G4 463 aaKnown RBP20.71■□□□□ 0.91
BPTF-208ENST00000544778 FEZF2Q8TBJ5 459 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 ILKAPQ9H0C8 392 aaPredicted RBP20.71■□□□□ 0.91
BPTF-208ENST00000544778 WDR41Q9HAD4 459 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 TRIM43BA6NCK2 446 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 GPR182O15218 404 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 GEMP55040 296 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 MTF1Q14872 753 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 IZUMO1Q8IYV9 350 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 NSL1Q96IY1 281 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 CPB2Q96IY4 423 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 DNAJC1Q96KC8 554 aaKnown RBP20.71■□□□□ 0.91
BPTF-208ENST00000544778 ROGDIQ9GZN7 287 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 MFSD1Q9H3U5 465 aa20.71■□□□□ 0.91
BPTF-208ENST00000544778 PAIP2BQ9ULR5 123 aaKnown RBP20.71■□□□□ 0.91
BPTF-208ENST00000544778 DCDC2CA8MYV0 355 aa20.7■□□□□ 0.91
BPTF-208ENST00000544778 HBP1O60381 514 aa20.7■□□□□ 0.91
BPTF-208ENST00000544778 URODP06132 367 aa20.7■□□□□ 0.91
BPTF-208ENST00000544778 AKAP5P24588 427 aa20.7■□□□□ 0.91
BPTF-208ENST00000544778 STIP1P31948 543 aaKnown RBP20.7■□□□□ 0.91
BPTF-208ENST00000544778 CTCFP49711 727 aaPredicted RBP20.7■□□□□ 0.91
BPTF-208ENST00000544778 SGCGQ13326 291 aa20.7■□□□□ 0.91
BPTF-208ENST00000544778 SLC18A3Q16572 532 aa20.7■□□□□ 0.91
BPTF-208ENST00000544778 DEFB128Q7Z7B8 93 aa20.7■□□□□ 0.91
BPTF-208ENST00000544778 ZCCHC17Q9NP64 241 aaKnown RBP20.7■□□□□ 0.91
BPTF-208ENST00000544778 TUBGCP4Q9UGJ1 667 aa20.7■□□□□ 0.91
BPTF-208ENST00000544778 SHANK2Q9UPX8 1470 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 TBC1D12O60347 775 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 EGFRP00533 1210 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 PSMC3P17980 439 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 PPIL6Q8IXY8 311 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 VPS33BQ9H267 617 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 IGFLR1Q9H665 355 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 IARS2Q9NSE4 1012 aaKnown RBP20.7■□□□□ 0.9
BPTF-208ENST00000544778 USP27XA6NNY8 438 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 TRAF2Q12933 501 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 ZNF618Q5T7W0 954 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 SARSP49591 514 aaKnown RBP20.7■□□□□ 0.9
BPTF-208ENST00000544778 OXCT1P55809 520 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 PRMT7Q9NVM4 692 aaPredicted RBP20.7■□□□□ 0.9
BPTF-208ENST00000544778 NCAPD2Q15021 1401 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 COMTP21964 271 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 GEMIN4P57678 1058 aaKnown RBP20.7■□□□□ 0.9
BPTF-208ENST00000544778 AKIRIN2Q53H80 203 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 NOL9Q5SY16 702 aaKnown RBP20.7■□□□□ 0.9
BPTF-208ENST00000544778 DDI2Q5TDH0 399 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 FAM45AQ8TCE6 357 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 TPD52L3Q96J77 140 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 TMEM8AQ9HCN3 771 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 FNTAP49354 379 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 COPAP53621 1224 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 PKN2Q16513 984 aaKnown RBP20.7■□□□□ 0.9
BPTF-208ENST00000544778 SEC16BQ96JE7 1060 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 SIK3Q9Y2K2 1263 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 STON1Q9Y6Q2 735 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 IGSF1Q8N6C5 1336 aa20.7■□□□□ 0.9
BPTF-208ENST00000544778 ENO4A6NNW6 628 aa20.69■□□□□ 0.9
BPTF-208ENST00000544778 ZW10O43264 779 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms