RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	ZNF618	Q5T7W0	954 aa		5.06	□□□□□ -1.6
RAP1B-231	ENST00000544639	LAIR1	Q6GTX8	287 aa		5.06	□□□□□ -1.6
RAP1B-231	ENST00000544639	LDLRAD3	Q86YD5	345 aa		5.06	□□□□□ -1.6
RAP1B-231	ENST00000544639	CYP2W1	Q8TAV3	490 aa		5.06	□□□□□ -1.6
RAP1B-231	ENST00000544639	ACTRT2	Q8TDY3	377 aa		5.06	□□□□□ -1.6
RAP1B-231	ENST00000544639	ATRIP	Q8WXE1	791 aa		5.06	□□□□□ -1.6
RAP1B-231	ENST00000544639	GLG1	Q92896	1179 aa		5.06	□□□□□ -1.6
RAP1B-231	ENST00000544639	RFK	Q969G6	155 aa		5.06	□□□□□ -1.6
RAP1B-231	ENST00000544639	ZNF566	Q969W8	418 aa		5.06	□□□□□ -1.6
RAP1B-231	ENST00000544639	TOR3A	Q9H497	397 aa		5.06	□□□□□ -1.6
RAP1B-231	ENST00000544639	GLOD4	Q9HC38	313 aa		5.06	□□□□□ -1.6
RAP1B-231	ENST00000544639	PLCB1	Q9NQ66	1216 aa		5.06	□□□□□ -1.6
RAP1B-231	ENST00000544639	TRMT13	Q9NUP7	481 aa	Known RBP	5.06	□□□□□ -1.6
RAP1B-231	ENST00000544639	DKK3	Q9UBP4	350 aa		5.06	□□□□□ -1.6
RAP1B-231	ENST00000544639	CDC23	Q9UJX2	597 aa		5.06	□□□□□ -1.6
RAP1B-231	ENST00000544639	COMMD10	Q9Y6G5	202 aa		5.06	□□□□□ -1.6
RAP1B-231	ENST00000544639		A1L4Q6	167 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	FOXN1	O15353	648 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	PLA2G6	O60733	806 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	NDST3	O95803	873 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	IL6R	P08887	468 aa	Predicted RBP	5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	HGF	P14210	728 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	GABRB3	P28472	473 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	UQCRC1	P31930	480 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	LIPA	P38571	399 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	IL6ST	P40189	918 aa	Predicted RBP	5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	CLCN2	P51788	898 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	MAPK10	P53779	464 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	TIAL1	Q01085	375 aa	Known RBP eCLIP	5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	STK3	Q13188	491 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	MANEAL	Q5VSG8	457 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	KAZN	Q674X7	775 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	MZT2A	Q6P582	158 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	USP17L6P	Q6QN14	398 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	CRTC1	Q6UUV9	634 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	PEG10	Q86TG7	708 aa	Known RBP	5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	SKAP1	Q86WV1	359 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	IZUMO1	Q8IYV9	350 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	ZNF384	Q8TF68	577 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	SOCS4	Q8WXH5	440 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	ZNF668	Q96K58	619 aa	Predicted RBP	5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	C17orf80	Q9BSJ5	609 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	SELENOO	Q9BVL4	669 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	STK33	Q9BYT3	514 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	WDR12	Q9GZL7	423 aa	Known RBP	5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	FOXJ2	Q9P0K8	574 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	LRIT1	Q9P2V4	623 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	VPS51	Q9UID3	782 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	SH2B3	Q9UQQ2	575 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	CEP83	Q9Y592	693 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	FER1L4	A9Z1Z3	1794 aa		5.05	□□□□□ -1.6
RAP1B-231	ENST00000544639	WDR33	Q9C0J8	1336 aa	Known RBP	5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	FAM234B	A2RU67	622 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	NXPH3	O95157	252 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	LDHA	P00338	332 aa	Known RBP	5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	ZFX	P17010	805 aa	Predicted RBP	5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	TYRP1	P17643	537 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	EPHA3	P29320	983 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	PRKAR1B	P31321	381 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	ATIC	P31939	592 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	BMPR2	Q13873	1038 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	LY6K	Q17RY6	165 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	TREML2	Q5T2D2	321 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	SLC9A4	Q6AI14	798 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	KIAA0408	Q6ZU52	694 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	CCDC150	Q8NCX0	1101 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	SLC9A6	Q92581	669 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	TMEM41A	Q96HV5	264 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	PDLIM2	Q96JY6	352 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	SNX27	Q96L92	541 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	FAM227B	Q96M60	508 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	TTPAL	Q9BTX7	342 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	TTLL2	Q9BWV7	592 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	DNAJB11	Q9UBS4	358 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	HPSE	Q9Y251	543 aa		5.04	□□□□□ -1.6
RAP1B-231	ENST00000544639	AGPS	O00116	658 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	HNRNPDL	O14979	420 aa	Known RBP	5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	ADAMTS3	O15072	1205 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	URI1	O94763	535 aa	Predicted RBP	5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	VNN1	O95497	513 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	ONECUT2	O95948	504 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	GC	P02774	474 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	FES	P07332	822 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	NR2F6	P10588	404 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	EGR1	P18146	543 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	PROZ	P22891	400 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	GRIA3	P42263	894 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	TEC	P42680	631 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	PGD	P52209	483 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	ZNF169	Q14929	603 aa	Predicted RBP	5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	C10orf62	Q5T681	223 aa	Predicted RBP	5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	C1orf228	Q6PIY5	440 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	PCSK4	Q6UW60	755 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	CCDC28A	Q8IWP9	274 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	SYTL1	Q8IYJ3	562 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	GLIS1	Q8NBF1	620 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	VPS37A	Q8NEZ2	397 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	R3HDM4	Q96D70	268 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	C18orf8	Q96DM3	657 aa		5.03	□□□□□ -1.6
RAP1B-231	ENST00000544639	ZDHHC12	Q96GR4	267 aa		5.03	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms