RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 CHMP2AO43633 222 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 TSPAN1O60635 241 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 C1QL1O75973 258 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 ABLIM3O94929 683 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 HTR3BO95264 441 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 FGF19O95750 216 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 PRB1P04280 392 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 NTRK1P04629 796 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 ADH5P11766 374 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 ENGP17813 658 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 DRD1P21728 446 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 AKAP5P24588 427 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 CIITAP33076 1130 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 NTF4P34130 210 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 VIPR2P41587 438 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 LIFRP42702 1097 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 DGKEP52429 567 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 EPHA5P54756 1037 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 PSMC5P62195 406 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 POU5F1BQ06416 359 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 LAMTOR4Q0VGL1 99 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 SLC14A1Q13336 389 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 PLD1Q13393 1074 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 LRP8Q14114 963 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 MXD4Q14582 209 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-220ENST00000544550 UGCGQ16739 394 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 ITPRIPL2Q3MIP1 535 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 TMEM196Q5HYL7 178 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 SPDYCQ5MJ68 293 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 ZBTB37Q5TC79 503 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 LRCH2Q5VUJ6 765 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 LARP1BQ659C4 914 aaKnown RBP4.49□□□□□ -1.69
SNHG1-220ENST00000544550 TPGS2Q68CL5 300 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 SLC8B1Q6J4K2 584 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 SLC27A1Q6PCB7 646 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 SYNE3Q6ZMZ3 975 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 Q6ZS46 218 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 SYT13Q7L8C5 426 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 DPH6Q7L8W6 267 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 MIER3Q7Z3K6 550 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 SYT12Q8IV01 421 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 FANCBQ8NB91 859 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 RNF214Q8ND24 703 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 CEP76Q8TAP6 659 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 MDM1Q8TC05 714 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 BPIFB1Q8TDL5 484 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 HASPINQ8TF76 798 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 CCDC12Q8WUD4 166 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-220ENST00000544550 CRYGNQ8WXF5 182 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 PIGKQ92643 395 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 ANAPC16Q96DE5 110 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 TCEAL4Q96EI5 215 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 TMEM87BQ96K49 555 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 ZSWIM3Q96MP5 696 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 UROC1Q96N76 676 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 FANCD2OSQ96PS1 177 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 HNRNPABQ99729 332 aaKnown RBP4.49□□□□□ -1.69
SNHG1-220ENST00000544550 LNPKQ9C0E8 428 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 WNT10AQ9GZT5 417 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 ATXN3LQ9H3M9 355 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 NXF3Q9H4D5 531 aaKnown RBP4.49□□□□□ -1.69
SNHG1-220ENST00000544550 CLMPQ9H6B4 373 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 MINDY3Q9H8M7 445 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 BARHL2Q9NY43 387 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 GTSE1Q9NYZ3 720 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 REV1Q9UBZ9 1251 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 APOBEC2Q9Y235 224 aaKnown RBP4.49□□□□□ -1.69
SNHG1-220ENST00000544550 INSL5Q9Y5Q6 135 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 SLC12A7Q9Y666 1083 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 GREB1Q4ZG55 1949 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 ESYT2A0FGR8 921 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 PRAMEF27A3QJZ7 478 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 CYSRT1A8MQ03 144 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 PATE3B3GLJ2 98 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 C9orf172C9J069 976 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 E9PAM4 449 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 INO80B-WBP1J3KQ70 363 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 TRDMT1O14717 391 aaKnown RBP4.48□□□□□ -1.69
SNHG1-220ENST00000544550 DCLK1O15075 740 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 MSH4O15457 936 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 B3GAT3O94766 335 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 ALDH1A2O94788 518 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 SYPP08247 313 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 CYP21A2P08686 494 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 FTH1P19P0C7X4 201 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 MYL4P12829 197 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 DRD2P14416 443 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 PLCG1P19174 1290 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 GNA11P29992 359 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 MCM5P33992 734 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 CCR2P41597 374 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 CHRNA4P43681 627 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 DHPSP49366 369 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-220ENST00000544550 MCM2P49736 904 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 ANTXR2P58335 489 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 PTENP60484 403 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 ROR1Q01973 937 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 NRG1Q02297 640 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-220ENST00000544550 GFPT1Q06210 699 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-220ENST00000544550 TWF1Q12792 350 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms