RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 PPP3CCP48454 512 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 ZXDAP98168 799 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 CNGA2Q16280 664 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 ARHGAP15Q53QZ3 475 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 TANGO2Q6ICL3 276 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 MON1AQ86VX9 555 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 UBALD2Q8IYN6 164 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 ANKRD20A12PQ8NF67 263 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 EDAQ92838 391 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 ERGIC2Q96RQ1 377 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 GANQ9H2C0 597 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 SMOC2Q9H3U7 446 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 EPHX3Q9H6B9 360 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 DNAJC12Q9UKB3 198 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 DUSP12Q9UNI6 340 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.22■□□□□ 0.83
DDX55-211ENST00000544429 ZNF840PA6NDX5 716 aa20.21■□□□□ 0.83
DDX55-211ENST00000544429 TPM2P07951 284 aa20.21■□□□□ 0.83
DDX55-211ENST00000544429 UCHL3P15374 230 aa20.21■□□□□ 0.83
DDX55-211ENST00000544429 PFKLP17858 780 aa20.21■□□□□ 0.83
DDX55-211ENST00000544429 TAF10Q12962 218 aa20.21■□□□□ 0.83
DDX55-211ENST00000544429 STILQ15468 1287 aa20.21■□□□□ 0.83
DDX55-211ENST00000544429 GOLGA7BQ2TAP0 167 aa20.21■□□□□ 0.83
DDX55-211ENST00000544429 RAB41Q5JT25 222 aa20.21■□□□□ 0.83
DDX55-211ENST00000544429 ARID3BQ8IVW6 561 aaPredicted RBP20.21■□□□□ 0.83
DDX55-211ENST00000544429 CMTM8Q8IZV2 173 aa20.21■□□□□ 0.83
DDX55-211ENST00000544429 MRPS31Q92665 395 aaKnown RBP20.21■□□□□ 0.83
DDX55-211ENST00000544429 RSPRY1Q96DX4 576 aa20.21■□□□□ 0.83
DDX55-211ENST00000544429 PLA2G2FQ9BZM2 168 aa20.21■□□□□ 0.83
DDX55-211ENST00000544429 FHOD1Q9Y613 1164 aa20.21■□□□□ 0.83
DDX55-211ENST00000544429 USP3Q9Y6I4 520 aa20.21■□□□□ 0.83
DDX55-211ENST00000544429 COL4A2P08572 1712 aa20.21■□□□□ 0.83
DDX55-211ENST00000544429 PES1O00541 588 aaKnown RBP20.2■□□□□ 0.82
DDX55-211ENST00000544429 PRAMEF12O95522 483 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 OLFM2O95897 454 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 CALCAP01258 141 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 CD19P15391 556 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 CDK11BP21127 795 aaKnown RBP20.2■□□□□ 0.82
DDX55-211ENST00000544429 KIF11P52732 1056 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 BCAT1P54687 386 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 MEA1Q16626 185 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 ARHGAP44Q17R89 818 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 FKBP15Q5T1M5 1219 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 TXNDC8Q6A555 127 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 LUZP1Q86V48 1076 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 PIGZQ86VD9 579 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 FAM71AQ8IYT1 594 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 ST13P5Q8NFI4 369 aaPredicted RBP20.2■□□□□ 0.82
DDX55-211ENST00000544429 SLITRK1Q96PX8 696 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 SLC22A12Q96S37 553 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 KXD1Q9BQD3 176 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 LSM14BQ9BX40 385 aaKnown RBP20.2■□□□□ 0.82
DDX55-211ENST00000544429 FBXO44Q9H4M3 255 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 ZFP14Q9HCL3 533 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 RTN4Q9NQC3 1192 aaKnown RBP20.2■□□□□ 0.82
DDX55-211ENST00000544429 OBP2AQ9NY56 170 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 SCML2Q9UQR0 700 aa20.2■□□□□ 0.82
DDX55-211ENST00000544429 FOXN3O00409 490 aaPredicted RBP20.19■□□□□ 0.82
DDX55-211ENST00000544429 XPO1O14980 1071 aaKnown RBP20.19■□□□□ 0.82
DDX55-211ENST00000544429 NARSO43776 548 aaKnown RBP20.19■□□□□ 0.82
DDX55-211ENST00000544429 OAS1P00973 400 aaKnown RBP20.19■□□□□ 0.82
DDX55-211ENST00000544429 SETSIPP0DME0 302 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 SRFP11831 508 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 KRT5P13647 590 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 BRD2P25440 801 aaKnown RBP20.19■□□□□ 0.82
DDX55-211ENST00000544429 VIPR2P41587 438 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 PLA2G4AP47712 749 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 KLK7P49862 253 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 PDE4CQ08493 712 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 BST2Q10589 180 aaKnown RBP20.19■□□□□ 0.82
DDX55-211ENST00000544429 VITQ6UXI7 678 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 MAB21L3Q8N8X9 362 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 PDZD8Q8NEN9 1154 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 SLC35F5Q8WV83 523 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 E2F7Q96AV8 911 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 LRRC3BQ96PB8 259 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 SLITRK6Q9H5Y7 841 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 ACP6Q9NPH0 428 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 C11orf16Q9NQ32 467 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 SLC2A4RGQ9NR83 387 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 TRPM5Q9NZQ8 1165 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 DAAM1Q9Y4D1 1078 aa20.19■□□□□ 0.82
DDX55-211ENST00000544429 C2orf78A6NCI8 922 aa20.18■□□□□ 0.82
DDX55-211ENST00000544429 TULP2O00295 520 aa20.18■□□□□ 0.82
DDX55-211ENST00000544429 EPHB6O15197 1021 aa20.18■□□□□ 0.82
DDX55-211ENST00000544429 CLCN1P35523 988 aa20.18■□□□□ 0.82
DDX55-211ENST00000544429 PGFP49763 221 aa20.18■□□□□ 0.82
DDX55-211ENST00000544429 TUBP50607 506 aa20.18■□□□□ 0.82
DDX55-211ENST00000544429 FCHO2Q0JRZ9 810 aa20.18■□□□□ 0.82
DDX55-211ENST00000544429 ZNF268Q14587 947 aaPredicted RBP20.18■□□□□ 0.82
DDX55-211ENST00000544429 SYCP1Q15431 976 aa20.18■□□□□ 0.82
DDX55-211ENST00000544429 LRSAM1Q6UWE0 723 aa20.18■□□□□ 0.82
DDX55-211ENST00000544429 CCDC186Q7Z3E2 898 aa20.18■□□□□ 0.82
DDX55-211ENST00000544429 MFSD6LQ8IWD5 586 aa20.18■□□□□ 0.82
DDX55-211ENST00000544429 ZNF606Q8WXB4 792 aa20.18■□□□□ 0.82
DDX55-211ENST00000544429 KCTD13Q8WZ19 329 aa20.18■□□□□ 0.82
DDX55-211ENST00000544429 FBXO32Q969P5 355 aa20.18■□□□□ 0.82
DDX55-211ENST00000544429 ASIC4Q96FT7 647 aa20.18■□□□□ 0.82
DDX55-211ENST00000544429 STK33Q9BYT3 514 aa20.18■□□□□ 0.82
DDX55-211ENST00000544429 HESX1Q9UBX0 185 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms