RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 ADRA1DP25100 572 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 GMPRP36959 345 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 CCNHP51946 323 aaPredicted RBP16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 IRX4P78413 519 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 SARNPP82979 210 aaKnown RBP16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 CYB5D1Q6P9G0 228 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 PIGWQ7Z7B1 504 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 FITM2Q8N6M3 262 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 CCDC110Q8TBZ0 833 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 RNF39Q9H2S5 420 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 SLC17A7Q9P2U7 560 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 SLC17A6Q9P2U8 582 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 L3MBTL1Q9Y468 752 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 SIGLEC16A6NMB1 481 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 UPP2O95045 317 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 TOP3BO95985 862 aaKnown RBP16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 TNFAIP8L3Q5GJ75 292 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 MFSD5Q6N075 450 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 PALM2Q8IXS6 379 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 CCDC77Q9BR77 488 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 IL1RAPL1Q9NZN1 696 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 MCM8Q9UJA3 840 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 B4GALT4O60513 344 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 UGT1A9O60656 530 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 LGR5O75473 907 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 ACAT1P24752 427 aaKnown RBP16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 LMO2P25791 158 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 GCKP35557 465 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 GRIA1P42261 906 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 CRADDP78560 199 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 TAPT1Q6NXT6 567 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 CCDC125Q86Z20 511 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 PYROXD2Q8N2H3 581 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 MAML1Q92585 1016 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 PITPNM3Q9BZ71 974 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 C2orf40Q9H1Z8 148 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 UGT1A7Q9HAW7 530 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 UGT1A10Q9HAW8 530 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 UGT1A8Q9HAW9 530 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 TNFSF13BQ9Y275 285 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 DNAJC25-GNG10A0A024R161 153 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 PDHXO00330 501 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 PPP1R12AO14974 1030 aaPredicted RBP16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 MAN1A1P33908 653 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 KRT81Q14533 505 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 TTC30AQ86WT1 665 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 ROPN1BQ9BZX4 212 aaPredicted RBP16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 TRIM6Q9C030 488 aaPredicted RBP16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 STMN4Q9H169 189 aaPredicted RBP16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 ROPN1Q9HAT0 212 aaPredicted RBP16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 RAB6BQ9NRW1 208 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 CITO14578 2027 aa16.5■□□□□ 0.23
SNRNP70-203ENST00000544278 ENO4A6NNW6 628 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 KCNN4O15554 427 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 TAC1P20366 129 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 ELK3P41970 407 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 MCCD1P59942 119 aaPredicted RBP16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 PITX1P78337 314 aaPredicted RBP16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 HADHQ16836 314 aaKnown RBP16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 PLPPR4Q7Z2D5 763 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 SPATA21Q7Z572 469 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 PRPF39Q86UA1 669 aaKnown RBP16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 FAM228AQ86W67 206 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 SLC35B2Q8TB61 432 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 ACAP3Q96P50 834 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 USP15Q9Y4E8 981 aaPredicted RBP16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 TSPAN1O60635 241 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 GABBR2O75899 941 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 RBL1P28749 1068 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 EPHX2P34913 555 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 BMPR2Q13873 1038 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 CATSPER4Q7RTX7 472 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 TRABD2AQ86V40 505 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 UNC5BQ8IZJ1 945 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 CKAP2Q8WWK9 683 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 ECT2Q9H8V3 914 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 PTPRFP10586 1907 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 EME2A4GXA9 379 aaPredicted RBP16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 NEFHP12036 1026 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 SMPD1P17405 629 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 OSBPP22059 807 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 BEX3Q00994 111 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 LVRNQ6Q4G3 990 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 CENPUQ71F23 418 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 FAM172AQ8WUF8 416 aa16.49■□□□□ 0.23
SNRNP70-203ENST00000544278 LSM8O95777 96 aaKnown RBP16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 TRUB2O95900 331 aaKnown RBP16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 APRTP07741 180 aa16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 OLIG2Q13516 323 aa16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 GRIK4Q16099 956 aa16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 TACO1Q9BSH4 297 aaKnown RBP16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 TMEM109Q9BVC6 243 aa16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 PRMT7Q9NVM4 692 aaPredicted RBP16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 FAM47DPA6NHR8 397 aa16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 IGF2BP3O00425 579 aaKnown RBP eCLIP16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 CLDN5O00501 218 aa16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 SLC25A27O95847 323 aa16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 SPDYCQ5MJ68 293 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms