RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 TRIM68Q6AZZ1 485 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 RINT1Q6NUQ1 792 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 ZNF529Q6P280 563 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 UBE3BQ7Z3V4 1068 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 SP8Q8IXZ3 490 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 TTC30BQ8N4P2 665 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 NKAIN3Q8N8D7 197 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 FAM46DQ8NEK8 389 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 SMARCC2Q8TAQ2 1214 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 SCAMP4Q969E2 229 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 RNF125Q96EQ8 232 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 REEP2Q9BRK0 252 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 MRI1Q9BV20 369 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 BRD8Q9H0E9 1235 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 SIK2Q9H0K1 926 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 KCNH6Q9H252 994 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 NELFAQ9H3P2 528 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 ABHD16BQ9H3Z7 469 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 PRDM13Q9H4Q3 707 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 XPNPEP3Q9NQH7 507 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 HAUS2Q9NVX0 235 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 ZSCAN32Q9NX65 697 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 SIRT5Q9NXA8 310 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 NFKBIL1Q9UBC1 381 aaPredicted RBP4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 DKK4Q9UBT3 224 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 FAM184BQ9ULE4 1060 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 C19orf53Q9UNZ5 99 aaPredicted RBP4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 DERAQ9Y315 318 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 CTDP1Q9Y5B0 961 aaPredicted RBP4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 CYP46A1Q9Y6A2 500 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 CUX1P39880 1505 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 GLI2P10070 1586 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 PLB1Q6P1J6 1458 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 CXorf49A8MYA2 514 aaPredicted RBP4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 P4HA2O15460 535 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 RRP9O43818 475 aaKnown RBP4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 TSPAN3O60637 253 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 URI1O94763 535 aaPredicted RBP4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 CHEK2O96017 543 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 DNTTP04053 509 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 JUNP05412 331 aaKnown RBP4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 CSF1P09603 554 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 VSIG10L2P0DP72 767 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 CYP2C9P11712 490 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 ALAS1P13196 640 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 ABCD3P28288 659 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 VIPR2P41587 438 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 KCNC1P48547 511 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 MRE11P49959 708 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 YBX1P67809 324 aaKnown RBP4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 GALNT2Q10471 571 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 DUSP8Q13202 625 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 RPS6KA2Q15349 733 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 NPY5RQ15761 445 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 SMAD1Q15797 465 aaKnown RBP4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 PLA1AQ53H76 456 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 UBXN11Q5T124 520 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 TTC22Q5TAA0 569 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 FAM160B1Q5W0V3 765 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 KRT40Q6A162 431 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 LARP4Q71RC2 724 aaKnown RBP eCLIP4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 R3HCC1LQ7Z5L2 792 aaKnown RBP4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 FRMD5Q7Z6J6 570 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 GAS2L3Q86XJ1 694 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 USP38Q8NB14 1042 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 OR5M3Q8NGP4 307 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 TBC1D22AQ8WUA7 517 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 LPPQ93052 612 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 DACT3Q96B18 629 aaPredicted RBP4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 GRAMD1AQ96CP6 724 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 SLC7A6OSQ96CW6 309 aaPredicted RBP4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 MED15Q96RN5 788 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 GORASP1Q9BQQ3 440 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 VPS16Q9H269 839 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 SLC25A32Q9H2D1 315 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 FAM83DQ9H4H8 585 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 PLSCR4Q9NRQ2 329 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 TMOD4Q9NZQ9 345 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 HPSEQ9Y251 543 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 ATP11BQ9Y2G3 1177 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 DNAJC16Q9Y2G8 782 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 MAGED1Q9Y5V3 778 aaPredicted RBP4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 TSPOAP1O95153 1857 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 ZMYM3Q14202 1370 aa4.39□□□□□ -1.71
SFSWAP-211ENST00000542813 RUSC2Q8N2Y8 1516 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 FAM170AA1A519 330 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 OR2W5A6NFC9 320 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 TSPY2A6NKD2 308 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 J3KTA2 159 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 CCNT2O60583 730 aaKnown RBP4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 PPP6R2O75170 966 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 PIAS2O75928 621 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 KIF20AO95235 890 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 SGPL1O95470 568 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 STARD3NLO95772 234 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 SCGB1D1O95968 90 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 VIPP01282 170 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 SNRPA1P09661 255 aaKnown RBP4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 TSPY3P0CV98 308 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 TSPY8P0CW00 308 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms