RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 SAE1Q9UBE0 346 aaPredicted RBP14.85□□□□□ -0.03
LDB3-207ENST00000542786 ZNF148Q9UQR1 794 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 SRRM3A6NNA2 597 aaPredicted RBP14.84□□□□□ -0.03
LDB3-207ENST00000542786 SEPT4O43236 478 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 GRAP2O75791 330 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 PECAM1P16284 738 aaPredicted RBP14.84□□□□□ -0.03
LDB3-207ENST00000542786 LSP1P33241 339 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 GNL1P36915 607 aaPredicted RBP14.84□□□□□ -0.03
LDB3-207ENST00000542786 BCAT1P54687 386 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 PPP2R2AP63151 447 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 BST2Q10589 180 aaKnown RBP14.84□□□□□ -0.03
LDB3-207ENST00000542786 DPYSL3Q14195 570 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 RNASEH2BQ5TBB1 312 aaKnown RBP14.84□□□□□ -0.03
LDB3-207ENST00000542786 TWF2Q6IBS0 349 aaKnown RBP14.84□□□□□ -0.03
LDB3-207ENST00000542786 SLC26A9Q7LBE3 791 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 ARCQ7LC44 396 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 ZDHHC17Q8IUH5 632 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 KLHDC9Q8NEP7 349 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 EPS8L3Q8TE67 593 aaKnown RBP14.84□□□□□ -0.03
LDB3-207ENST00000542786 HHIPL1Q96JK4 782 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 HESX1Q9UBX0 185 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 ST3GAL5Q9UNP4 418 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 CASP8AP2Q9UKL3 1982 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 CAPN15O75808 1086 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 PDGFRBP09619 1106 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 FAM163BP0C2L3 166 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 IL4RP24394 825 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 HPDP32754 393 aaPredicted RBP14.84□□□□□ -0.03
LDB3-207ENST00000542786 PRKCZQ05513 592 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 CACNB2Q08289 660 aaPredicted RBP14.84□□□□□ -0.03
LDB3-207ENST00000542786 MMRN1Q13201 1228 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 AUHQ13825 339 aaKnown RBP14.84□□□□□ -0.03
LDB3-207ENST00000542786 SCUBE3Q8IX30 993 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 ADGRF2Q8IZF7 708 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 ARFGAP2Q8N6H7 521 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 TTC13Q8NBP0 860 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 APPL2Q8NEU8 664 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 UHMK1Q8TAS1 419 aaKnown RBP14.84□□□□□ -0.03
LDB3-207ENST00000542786 TEKT4Q8WW24 435 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 HSPH1Q92598 858 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 CENPIQ92674 756 aaPredicted RBP14.84□□□□□ -0.03
LDB3-207ENST00000542786 CFAP57Q96MR6 1250 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 TMEM121Q9BTD3 319 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 RSAD1Q9HA92 442 aa14.84□□□□□ -0.03
LDB3-207ENST00000542786 THSD7BQ9C0I4 1608 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 APOC4-APOC2K7ER74 178 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 GABRDO14764 452 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 TCEA3O75764 348 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 APOC2P02655 101 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 TFE3P19532 575 aaPredicted RBP14.83□□□□□ -0.04
LDB3-207ENST00000542786 PTPN9P43378 593 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 GDF10P55107 478 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 HDAC4P56524 1084 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 DYNLT1P63172 113 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 PTGISQ16647 500 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 ODF2Q5BJF6 829 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 GSTA5Q7RTV2 222 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 CROCCP2Q86T23 111 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 KCTD6Q8NC69 237 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 CLEC4CQ8WTT0 213 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 ROPN1BQ9BZX4 212 aaPredicted RBP14.83□□□□□ -0.04
LDB3-207ENST00000542786 SNX25Q9H3E2 840 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 ROPN1Q9HAT0 212 aaPredicted RBP14.83□□□□□ -0.04
LDB3-207ENST00000542786 CHST12Q9NRB3 414 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.83□□□□□ -0.04
LDB3-207ENST00000542786 FAM105AQ9NUU6 356 aa14.83□□□□□ -0.04
LDB3-207ENST00000542786 DNAJC17Q9NVM6 304 aaKnown RBP14.83□□□□□ -0.04
LDB3-207ENST00000542786 FARP1Q9Y4F1 1045 aaPredicted RBP14.83□□□□□ -0.04
LDB3-207ENST00000542786 IVLP07476 585 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 CST5P28325 142 aaPredicted RBP14.82□□□□□ -0.04
LDB3-207ENST00000542786 ADORA2BP29275 332 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 AFF1P51825 1210 aaKnown RBP14.82□□□□□ -0.04
LDB3-207ENST00000542786 IFI35P80217 286 aaPredicted RBP14.82□□□□□ -0.04
LDB3-207ENST00000542786 GPS1Q13098 491 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 MORF4L2Q15014 288 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 KYNUQ16719 465 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 C6orf118Q5T5N4 469 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 KIAA0319Q5VV43 1072 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 PAQR9Q6ZVX9 377 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 MRPL10Q7Z7H8 261 aaKnown RBP14.82□□□□□ -0.04
LDB3-207ENST00000542786 VSIG1Q86XK7 387 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 FUKQ8N0W3 1084 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 SLC2A14Q8TDB8 520 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 PRCCQ92733 491 aaPredicted RBP14.82□□□□□ -0.04
LDB3-207ENST00000542786 FAF2Q96CS3 445 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 HNRNPABQ99729 332 aaKnown RBP14.82□□□□□ -0.04
LDB3-207ENST00000542786 C10orf88Q9H8K7 445 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 AGO3Q9H9G7 860 aaKnown RBP14.82□□□□□ -0.04
LDB3-207ENST00000542786 MIOSQ9NXC5 875 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 BCCIPQ9P287 314 aaKnown RBP eCLIP14.82□□□□□ -0.04
LDB3-207ENST00000542786 TPX2Q9ULW0 747 aaKnown RBP14.82□□□□□ -0.04
LDB3-207ENST00000542786 SHOC2Q9UQ13 582 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 HUS1O60921 280 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 ATP2C2O75185 946 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 ACSL3O95573 720 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 AGTP01019 485 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 ABHD2P08910 425 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 RARBP10826 455 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 MMP13P45452 471 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 DSC3Q14574 896 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms