RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 DNAJC3Q13217 504 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 HIF1AQ16665 826 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 DUOXA2Q1HG44 320 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 PTPN20Q4JDL3 420 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 SEZ6Q53EL9 994 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 NOL9Q5SY16 702 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 FNBP1LQ5T0N5 605 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 IER5Q5VY09 327 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ANKRD22Q5VYY1 191 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 DENND1BQ6P3S1 775 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 DCUN1D2Q6PH85 259 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 FAM47EQ6ZV65 393 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ERICH1Q86X53 443 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 PPIL6Q8IXY8 311 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 THNSL1Q8IYQ7 743 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ZBED8Q8IZ13 594 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 KIAA0319LQ8IZA0 1049 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 AGGF1Q8N302 714 aaeCLIP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 KIF2BQ8N4N8 673 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 FAM160A2Q8N612 972 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 CHST13Q8NET6 341 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 CMASQ8NFW8 434 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 GIMAP7Q8NHV1 300 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 FBF1Q8TES7 1133 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 PRPF31Q8WWY3 499 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 RAB3IPQ96QF0 476 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ARHGAP9Q9BRR9 750 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 TMEM121Q9BTD3 319 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 MAK16Q9BXY0 300 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 MRPL4Q9BYD3 311 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 MTMR12Q9C0I1 747 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 MYLK2Q9H1R3 596 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 TUT1Q9H6E5 874 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ACSS3Q9H6R3 686 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 TLE6Q9H808 572 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 KIF9Q9HAQ2 790 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 PTPRHQ9HD43 1115 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 SLCO1B3Q9NPD5 702 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 PICK1Q9NRD5 415 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 NRBP2Q9NSY0 501 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 HOXC10Q9NYD6 342 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 NOP53Q9NZM5 478 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 CYTH4Q9UIA0 394 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 TRIM33Q9UPN9 1127 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 L3MBTL1Q9Y468 752 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ANK1P16157 1881 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 A8MUI8 341 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ZBTB42B2RXF5 422 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 SGK1O00141 431 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 NFKBIEO00221 500 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 C2CD2LO14523 706 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 GAS2O43903 313 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 DCTN3O75935 186 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ENDOD1O94919 500 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 DHRS4L1P0CG22 281 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 KRT15P19012 456 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 CA4P22748 312 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 KDELR1P24390 212 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 POLR2BP30876 1174 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 PHBP35232 272 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 GABRB2P47870 512 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 CTCFP49711 727 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 GMPSP49915 693 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 MMP16P51512 607 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 STAT5BP51692 787 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 GDF10P55107 478 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 SEC13P55735 322 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ARL4CP56559 192 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 LACTBP83111 547 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 OTUD4Q01804 1114 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 TAGLNQ01995 201 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 CNTN2Q02246 1040 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 GAD2Q05329 585 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ADCY1Q08828 1119 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ACAP1Q15027 740 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 SETDB1Q15047 1291 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 KLHL38Q2WGJ6 581 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 SLC45A4Q5BKX6 768 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 CYP4A22Q5TCH4 519 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 FAM160B1Q5W0V3 765 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 LVRNQ6Q4G3 990 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 TSHZ1Q6ZSZ6 1077 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 SH2D5Q6ZV89 423 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 OTOAQ7RTW8 1153 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 C4orf33Q8N1A6 199 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 BANPQ8N9N5 519 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ATP11CQ8NB49 1132 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 JOSD2Q8TAC2 188 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ACTL9Q8TC94 416 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 LRRC8CQ8TDW0 803 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 SH3TC2Q8TF17 1288 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 NSMCE1Q8WV22 266 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 DCAKDQ8WVC6 231 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 JDP2Q8WYK2 163 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ZNF75CPQ92670 426 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 N4BP2L2Q92802 583 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ALKBH8Q96BT7 664 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ACSF2Q96CM8 615 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 SLC7A6OSQ96CW6 309 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ERP27Q96DN0 273 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms