RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 ARMCX2Q7L311 632 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 SLAIN1Q8ND83 568 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 NDNQ99608 321 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 GBA2Q9HCG7 927 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 KCNK9Q9NPC2 374 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 TOPORSQ9NS56 1045 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 SUCLA2Q9P2R7 463 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 SCOCQ9UIL1 159 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 LNPEPQ9UIQ6 1025 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 ZMIZ1Q9ULJ6 1067 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 LRRC42Q9Y546 428 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 ASB3Q9Y575 518 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 ADGRA2Q96PE1 1338 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 PGRMC1O00264 195 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 HNRNPDLO14979 420 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 HNRNPCP07910 306 aaKnown RBP eCLIP8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 ADORA2AP29274 412 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 MMP13P45452 471 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 MXI1P50539 228 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 EIF3BP55884 814 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 ARHGAP1Q07960 439 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 LAPTM5Q13571 262 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 CCDC6Q16204 474 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 SLC44A4Q53GD3 710 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 RASIP1Q5U651 963 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 SPRYD7Q5W111 196 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 C15orf39Q6ZRI6 1047 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 CEP128Q6ZU80 1094 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 ABRAQ8N0Z2 381 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 GPD1LQ8N335 351 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 SPERTQ8NA61 448 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 GOLM1Q8NBJ4 401 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 NPLOC4Q8TAT6 608 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 EPS8L3Q8TE67 593 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 SLC7A3Q8WY07 619 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 FAM167AQ96KS9 214 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 GBP5Q96PP8 586 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 TMEM237Q96Q45 408 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 RAB3IPQ96QF0 476 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 PSKH2Q96QS6 385 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 POP1Q99575 1024 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 CGREF1Q99674 301 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 ADAM7Q9H2U9 754 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 RNPEPL1Q9HAU8 725 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 SPC25Q9HBM1 224 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 NRBP2Q9NSY0 501 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 ZSWIM8A7E2V4 1837 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 ASB14A6NK59 587 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 CES1P23141 567 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 ETV3P41162 512 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 PTDSS1P48651 473 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 CCNG1P51959 295 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 RCN2Q14257 317 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 SLC29A2Q14542 456 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 CCDC153Q494R4 210 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 VSIG1Q86XK7 387 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 ATP8B4Q8TF62 1192 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 POMGNT1Q8WZA1 660 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 TMEM134Q9H6X4 195 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 TMEM8AQ9HCN3 771 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 RIMKLBQ9ULI2 386 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 USH1CQ9Y6N9 552 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 TTLL13PA6NNM8 815 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 FOXN3O00409 490 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 FAM189A1O60320 539 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 ZBTB48P10074 688 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 TXNP10599 105 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 GNAZP19086 355 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 GTF2H1P32780 548 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 GPC3P51654 580 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 BCL2A1Q16548 175 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 GALNTL6Q49A17 601 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 TMEM164Q5U3C3 297 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 CST9Q5W186 159 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 ZC3H18Q86VM9 953 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 NPAS4Q8IUM7 802 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 CCNJLQ8IV13 435 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 GALNT6Q8NCL4 622 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 TTC8Q8TAM2 541 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 PSPC1Q8WXF1 523 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 ZNF516Q92618 1163 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 KAT5Q92993 513 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 KREMEN1Q96MU8 473 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 SPATA33Q96N06 139 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 RRAGCQ9HB90 399 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 ZNF148Q9UQR1 794 aa8.35□□□□□ -1.07
PDLIM5-221ENST00000542407 A0A1W2PQ67 120 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 M0QX08 132 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 RASA4O43374 803 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 EXTL3O43909 919 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 ADCY3O60266 1144 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 MARK3P27448 753 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 NLRP11P59045 1033 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 CCNA1P78396 465 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 GRB14Q14449 540 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 PCSK7Q16549 785 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 TMTC4Q5T4D3 741 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 UBAP2Q5T6F2 1119 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 KRT39Q6A163 491 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 ALKBH5Q6P6C2 394 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms