RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 TBC1D20Q96BZ9 403 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 SNX22Q96L94 193 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 KLHL32Q96NJ5 620 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 RMDN3Q96TC7 470 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 C1orf43Q9BWL3 253 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 IMPG2Q9BZV3 1241 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 SIDT1Q9NXL6 827 aaKnown RBP4.9□□□□□ -1.63
SNHG1-217ENST00000541578 HDAC9Q9UKV0 1011 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 ZDHHC8Q9ULC8 765 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 SLC45A2Q9UMX9 530 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 NEU2Q9Y3R4 380 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 INSL6Q9Y581 213 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 BIVM-ERCC5R4GMW8 1640 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 UACAQ9BZF9 1416 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 EPRSP07814 1512 aaKnown RBP4.89□□□□□ -1.63
SNHG1-217ENST00000541578 RUSC2Q8N2Y8 1516 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 PRAMEF33A0A0G2JMD5 474 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 A0A1W2PPC4 97 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 F8W8V4 182 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 M0R3H8 397 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 F2RL2O00254 374 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 PODXLO00592 558 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 PRAMEF10O60809 474 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 ZFPL1O95159 310 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 AGR2O95994 175 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 ANXA1P04083 346 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 KCNA2P16389 499 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 PHKA1P46020 1223 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 CARSP49589 748 aaKnown RBP4.89□□□□□ -1.63
SNHG1-217ENST00000541578 GEMIN4P57678 1058 aaKnown RBP4.89□□□□□ -1.63
SNHG1-217ENST00000541578 RPS7P62081 194 aaKnown RBP4.89□□□□□ -1.63
SNHG1-217ENST00000541578 MRPS35P82673 323 aaKnown RBP4.89□□□□□ -1.63
SNHG1-217ENST00000541578 FPGSQ05932 587 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 PIGFQ07326 219 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 DDX10Q13206 875 aaKnown RBP4.89□□□□□ -1.63
SNHG1-217ENST00000541578 ZNF169Q14929 603 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-217ENST00000541578 PFKFB4Q16877 469 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 CCDC93Q567U6 631 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 DPY19L2P1Q6NXN4 242 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 CLEC4GQ6UXB4 293 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 MAATS1Q7Z4T9 603 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 PCGF5Q86SE9 256 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 CELF5Q8N6W0 485 aaKnown RBP4.89□□□□□ -1.63
SNHG1-217ENST00000541578 SMCR8Q8TEV9 937 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-217ENST00000541578 NMD3Q96D46 503 aaKnown RBP4.89□□□□□ -1.63
SNHG1-217ENST00000541578 LRRC46Q96FV0 321 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 FAM167BQ9BTA0 163 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 STK31Q9BXU1 1019 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 STK33Q9BYT3 514 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 TRIM54Q9BYV2 358 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 MAGEB5Q9BZ81 275 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 ZNF518BQ9C0D4 1074 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 BRD9Q9H8M2 597 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-217ENST00000541578 TBC1D23Q9NUY8 699 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 ZSCAN32Q9NX65 697 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 KCTD5Q9NXV2 234 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 MAP3K20Q9NYL2 800 aaKnown RBP4.89□□□□□ -1.63
SNHG1-217ENST00000541578 LRIT1Q9P2V4 623 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 MYO1AQ9UBC5 1043 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 ZNF212Q9UDV6 495 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 LRRFIP2Q9Y608 721 aaKnown RBP4.89□□□□□ -1.63
SNHG1-217ENST00000541578 SALL3Q9BXA9 1300 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 CFAP43Q8NDM7 1665 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 CD109Q6YHK3 1445 aa4.89□□□□□ -1.63
SNHG1-217ENST00000541578 PEX1O43933 1283 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 DHRS4L1P0CG22 281 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 PDIA3P30101 505 aaKnown RBP4.88□□□□□ -1.63
SNHG1-217ENST00000541578 CLK3P49761 638 aaKnown RBP4.88□□□□□ -1.63
SNHG1-217ENST00000541578 POU6F2P78424 691 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-217ENST00000541578 SATB1Q01826 763 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 SF3B3Q15393 1217 aaKnown RBP4.88□□□□□ -1.63
SNHG1-217ENST00000541578 RSRC2Q7L4I2 434 aaKnown RBP4.88□□□□□ -1.63
SNHG1-217ENST00000541578 ADGRG3Q86Y34 549 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 YAF2Q8IY57 180 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 CFAP52Q8N1V2 620 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 NAXEQ8NCW5 288 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 SIMC1Q8NDZ2 872 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 TMIEQ8NEW7 156 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 CAGE1Q8TC20 777 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 SSH3Q8TE77 659 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 TMEM125Q96AQ2 219 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 SKA1Q96BD8 255 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 MRGPRX1Q96LB2 322 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 EIF2AK1Q9BQI3 630 aaKnown RBP4.88□□□□□ -1.63
SNHG1-217ENST00000541578 SIK2Q9H0K1 926 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 OBP2BQ9NPH6 170 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 TM7SF3Q9NS93 570 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 INTS13Q9NVM9 706 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 STK32BQ9NY57 414 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 VSX1Q9NZR4 365 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-217ENST00000541578 COL20A1Q9P218 1284 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 MAN2B2Q9Y2E5 1009 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 MED16Q9Y2X0 877 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 PTPRMP28827 1452 aa4.88□□□□□ -1.63
SNHG1-217ENST00000541578 MAGI3Q5TCQ9 1506 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 CCDC195A0A1B0GUA6 201 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 TRIM43BA6NCK2 446 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 RRN3P2A6NIE6 340 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 NT5C1B-RDH14C9J2C7 533 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms