RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 SNRNP70P08621 437 aaKnown RBP5.95□□□□□ -1.46
DDB1-219ENST00000541513 FTH1P19P0C7X4 201 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 TMIGD3P0DMS9 266 aaPredicted RBP5.95□□□□□ -1.46
DDB1-219ENST00000541513 PCP11498 1178 aaKnown RBP5.95□□□□□ -1.46
DDB1-219ENST00000541513 PTPN2P17706 415 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 TFEBP19484 476 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 RXRAP19793 462 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 BMP8BP34820 402 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 GJA4P35212 333 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 PSMC2P35998 433 aaKnown RBP5.95□□□□□ -1.46
DDB1-219ENST00000541513 TCF7P36402 384 aaPredicted RBP5.95□□□□□ -1.46
DDB1-219ENST00000541513 TMPOP42166 694 aaKnown RBP5.95□□□□□ -1.46
DDB1-219ENST00000541513 FLT3LGP49771 235 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 MLLT6P55198 1093 aaPredicted RBP5.95□□□□□ -1.46
DDB1-219ENST00000541513 SESN2P58004 480 aaPredicted RBP5.95□□□□□ -1.46
DDB1-219ENST00000541513 RPL11P62913 178 aaKnown RBP5.95□□□□□ -1.46
DDB1-219ENST00000541513 HMGN5P82970 282 aaKnown RBP5.95□□□□□ -1.46
DDB1-219ENST00000541513 CDC42EP1Q00587 391 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 PPP3CAQ08209 521 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 SLC20A2Q08357 652 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 GALNT2Q10471 571 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 AIMP1Q12904 312 aaKnown RBP5.95□□□□□ -1.46
DDB1-219ENST00000541513 TMEM132BQ14DG7 1078 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 GRIK5Q16478 980 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 ARHGAP15Q53QZ3 475 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 PRAMEF14Q5SWL7 426 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 CYP20A1Q6UW02 462 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 RNF44Q7L0R7 432 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 KANSL1Q7Z3B3 1105 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 PPP1R42Q7Z4L9 355 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 ZNF804AQ7Z570 1209 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 CPLX4Q7Z7G2 160 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 GLRX5Q86SX6 157 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 NLRP10Q86W26 655 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 MICU3Q86XE3 530 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 KRT73Q86Y46 540 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 KIAA2013Q8IYS2 634 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 IL22RA1Q8N6P7 574 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 OR2I1PQ8NGU4 316 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 SCAMP5Q8TAC9 235 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 ETNPPLQ8TBG4 499 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 BICD2Q8TD16 824 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 DEPDC1BQ8WUY9 529 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 ZFAND2BQ8WV99 257 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 DPF2Q92785 391 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 CUL5Q93034 780 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 EXOC4Q96A65 974 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 ZNF653Q96CK0 615 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 SNX27Q96L92 541 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 ATP6V0BQ99437 205 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 ADI1Q9BV57 179 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 ACAT2Q9BWD1 397 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 JAM3Q9BX67 310 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 GSX1Q9H4S2 264 aaPredicted RBP5.95□□□□□ -1.46
DDB1-219ENST00000541513 TAF1DQ9H5J8 278 aaPredicted RBP5.95□□□□□ -1.46
DDB1-219ENST00000541513 WDCPQ9H6R7 721 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 SUDS3Q9H7L9 328 aaPredicted RBP5.95□□□□□ -1.46
DDB1-219ENST00000541513 SMURF2Q9HAU4 748 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 RAD18Q9NS91 495 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 CLDND1Q9NY35 253 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 NDUFAF4Q9P032 175 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 WASF3Q9UPY6 502 aa5.95□□□□□ -1.46
DDB1-219ENST00000541513 CICQ96RK0 1608 aaPredicted RBP5.95□□□□□ -1.46
DDB1-219ENST00000541513 ADARB2-AS1A8MUL3 147 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 F8W031 263 aaPredicted RBP5.94□□□□□ -1.46
DDB1-219ENST00000541513 PES1O00541 588 aaKnown RBP5.94□□□□□ -1.46
DDB1-219ENST00000541513 C2CD2LO14523 706 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 FCHO1O14526 889 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 NKRFO15226 690 aaKnown RBP eCLIP5.94□□□□□ -1.46
DDB1-219ENST00000541513 ZBTB14O43829 449 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 PRPF6O94906 941 aaKnown RBP5.94□□□□□ -1.46
DDB1-219ENST00000541513 BMP1P13497 986 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 IL1R1P14778 569 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 GAP43P17677 238 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 FGFR3P22607 806 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 MAPK3P27361 379 aaPredicted RBP5.94□□□□□ -1.46
DDB1-219ENST00000541513 CDC25BP30305 580 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 EIF2DP41214 584 aaKnown RBP5.94□□□□□ -1.46
DDB1-219ENST00000541513 TRPC1P48995 793 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 AKAP17AQ02040 695 aaKnown RBP5.94□□□□□ -1.46
DDB1-219ENST00000541513 MPP3Q13368 585 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 MORF4L2Q15014 288 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 GPR68Q15743 365 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 MAPKAPK3Q16644 382 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 EXOSC6Q5RKV6 272 aaKnown RBP5.94□□□□□ -1.46
DDB1-219ENST00000541513 PLEKHS1Q5SXH7 462 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 DEPDC1Q5TB30 811 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 EMC10Q5UCC4 262 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 GARNL3Q5VVW2 1013 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 KIAA1841Q6NSI8 718 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 DENND5BQ6ZUT9 1274 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 CEP68Q76N32 757 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 PIWIL3Q7Z3Z3 882 aaKnown RBP5.94□□□□□ -1.46
DDB1-219ENST00000541513 TRIM46Q7Z4K8 759 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 NPAS3Q8IXF0 933 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 ULK2Q8IYT8 1036 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 Q8NFD4 153 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 IPMKQ8NFU5 416 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 UHMK1Q8TAS1 419 aaKnown RBP5.94□□□□□ -1.46
DDB1-219ENST00000541513 BRIX1Q8TDN6 353 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms