RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 PLEKHG4Q58EX7 1191 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 KCNT1Q5JUK3 1230 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 TRNP1Q6NT89 227 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 SCYL2Q6P3W7 929 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 TTC27Q6P3X3 843 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 DCLRE1AQ6PJP8 1040 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 CCDC137Q6PK04 289 aaKnown RBP10.02□□□□□ -0.81
PAAF1-209ENST00000540659 OLFML1Q6UWY5 402 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 CD300LGQ6UXG3 332 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 CHRDL2Q6WN34 429 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 PAQR9Q6ZVX9 377 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 ANKRD33Q7Z3H0 272 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 MAATS1Q7Z4T9 603 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 ANKS1BQ7Z6G8 1248 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 TMEM110Q86TL2 294 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 FAM35AQ86V20 835 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 DDX42Q86XP3 938 aaKnown RBP eCLIP10.02□□□□□ -0.81
PAAF1-209ENST00000540659 CCDC105Q8IYK2 499 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 RCOR2Q8IZ40 523 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 ABI1Q8IZP0 508 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 FUKQ8N0W3 1084 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 ARFGAP1Q8N6T3 406 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 NIPA2Q8N8Q9 360 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 EXD1Q8NHP7 514 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 MAIP1Q8WWC4 291 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 NDRG1Q92597 394 aaKnown RBP10.02□□□□□ -0.81
PAAF1-209ENST00000540659 RUBCNQ92622 972 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 MYLPFQ96A32 169 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 TRIM43Q96BQ3 446 aaPredicted RBP10.02□□□□□ -0.81
PAAF1-209ENST00000540659 RBM41Q96IZ5 413 aaKnown RBP10.02□□□□□ -0.81
PAAF1-209ENST00000540659 SLITRK1Q96PX8 696 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 TMEM209Q96SK2 561 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 HNRNPABQ99729 332 aaKnown RBP10.02□□□□□ -0.81
PAAF1-209ENST00000540659 FAM118BQ9BPY3 351 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 DUSP16Q9BY84 665 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 RHOBTB2Q9BYZ6 727 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 OSBPL8Q9BZF1 889 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 HIPK3Q9H422 1215 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 KRT82Q9NSB4 513 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 TBC1D13Q9NVG8 400 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 TMEM161AQ9NX61 479 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 DDX56Q9NY93 547 aaKnown RBP10.02□□□□□ -0.81
PAAF1-209ENST00000540659 DNAJB4Q9UDY4 337 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 CDH9Q9ULB4 789 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 NFU1Q9UMS0 254 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 PRG3Q9Y2Y8 225 aaPredicted RBP10.02□□□□□ -0.81
PAAF1-209ENST00000540659 LRRD1A4D1F6 860 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 C2CD4BA6NLJ0 364 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 AP1G2O75843 785 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 SASH3O75995 380 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 TRUB2O95900 331 aaKnown RBP10.01□□□□□ -0.81
PAAF1-209ENST00000540659 NPR3P17342 541 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 IL1R2P27930 398 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 TNFRSF8P28908 595 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 MIPP30301 263 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 CHRNA3P32297 505 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 CYP2C18P33260 490 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 COILP38432 576 aaPredicted RBP10.01□□□□□ -0.81
PAAF1-209ENST00000540659 MAGEA10P43363 369 aaPredicted RBP10.01□□□□□ -0.81
PAAF1-209ENST00000540659 ACADSBP45954 432 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 PLA2G4AP47712 749 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 AARSP49588 968 aaKnown RBP eCLIP10.01□□□□□ -0.81
PAAF1-209ENST00000540659 ZNF143P52747 638 aaPredicted RBP10.01□□□□□ -0.81
PAAF1-209ENST00000540659 EPHB4P54760 987 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 FAM189BP81408 668 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 SLC25A11Q02978 314 aaKnown RBP10.01□□□□□ -0.81
PAAF1-209ENST00000540659 ADIGQ0VDE8 80 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 FAAP100Q0VG06 881 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 DHX34Q14147 1143 aaKnown RBP10.01□□□□□ -0.81
PAAF1-209ENST00000540659 HLTFQ14527 1009 aaKnown RBP eCLIP10.01□□□□□ -0.81
PAAF1-209ENST00000540659 CCDC14Q49A88 953 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 OVOS1Q6IE37 1185 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 MFSD7Q6UXD7 560 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 SPOCD1Q6ZMY3 1216 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 CLEC20AQ6ZU45 233 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 SND1Q7KZF4 910 aaKnown RBP eCLIP10.01□□□□□ -0.81
PAAF1-209ENST00000540659 HDXQ7Z353 690 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 PIGZQ86VD9 579 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 THEM5Q8N1Q8 247 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 FNIP1Q8TF40 1166 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 STK32AQ8WU08 396 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 FAM172AQ8WUF8 416 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 ATG4AQ8WYN0 398 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 RAPGEF5Q92565 580 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 HAUS1Q96CS2 278 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 PCED1BQ96HM7 432 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 CCDC114Q96M63 670 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 RTP3Q9BQQ7 232 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 LRRC4Q9HBW1 653 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 NGRNQ9NPE2 291 aaKnown RBP10.01□□□□□ -0.81
PAAF1-209ENST00000540659 CHST7Q9NS84 486 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 PRKAG2Q9UGJ0 569 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 RASAL2Q9UJF2 1139 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 USP18Q9UMW8 372 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 UTP11Q9Y3A2 253 aaKnown RBP10.01□□□□□ -0.81
PAAF1-209ENST00000540659 MYO16Q9Y6X6 1858 aa10.01□□□□□ -0.81
PAAF1-209ENST00000540659 LAMA2P24043 3122 aaKnown RBP10.01□□□□□ -0.81
PAAF1-209ENST00000540659 FNDC1Q4ZHG4 1894 aaPredicted RBP10□□□□□ -0.81
PAAF1-209ENST00000540659 LAMA3Q16787 3333 aa10□□□□□ -0.81
PAAF1-209ENST00000540659 FAM187AA6NFU0 413 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms