RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 HMGA1P17096 107 aaKnown RBP12.15□□□□□ -0.46
TMEM258-205ENST00000540434 PTPN2P17706 415 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 PTPN1P18031 435 aaKnown RBP12.15□□□□□ -0.46
TMEM258-205ENST00000540434 GTF2H1P32780 548 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 TNNC1P63316 161 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 MYL7Q01449 175 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 APBA1Q02410 837 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 MGAT5BQ3V5L5 792 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 PABPC1LQ4VXU2 614 aaKnown RBP12.15□□□□□ -0.46
TMEM258-205ENST00000540434 HSP90AA4PQ58FG1 418 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 MDH1BQ5I0G3 518 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 STXBP5Q5T5C0 1151 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 KRT39Q6A163 491 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 TANGO2Q6ICL3 276 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 KIAA1211LQ6NV74 962 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 C11orf57Q6ZUT1 292 aaPredicted RBP12.15□□□□□ -0.46
TMEM258-205ENST00000540434 DNAJB7Q7Z6W7 309 aaPredicted RBP12.15□□□□□ -0.46
TMEM258-205ENST00000540434 MLKLQ8NB16 471 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 MYLPFQ96A32 169 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 MCRS1Q96EZ8 462 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 PCED1BQ96HM7 432 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 SEPT5Q99719 369 aaPredicted RBP12.15□□□□□ -0.46
TMEM258-205ENST00000540434 GTPBP4Q9BZE4 634 aaKnown RBP12.15□□□□□ -0.46
TMEM258-205ENST00000540434 IL21Q9HBE4 155 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 RAB20Q9NX57 234 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 PCDHB5Q9Y5E4 795 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 EML5Q05BV3 1969 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 IGSF10Q6WRI0 2623 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 ADAMTS20P59510 1910 aa12.15□□□□□ -0.46
TMEM258-205ENST00000540434 NCANO14594 1321 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 HELZ2Q9BYK8 2649 aaKnown RBP12.14□□□□□ -0.47
TMEM258-205ENST00000540434 BICDL2A1A5D9 508 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 TMEM8BA6NDV4 472 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 K7ESF4 209 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 FOXD2O60548 495 aaPredicted RBP12.14□□□□□ -0.47
TMEM258-205ENST00000540434 CALCAP01258 141 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 ZNF806P0C7X5 589 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 BDNFP23560 247 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 PPP1R2P41236 205 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 CXCL12P48061 93 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 FMO5P49326 533 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 MXI1P50539 228 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 CCR3P51677 355 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 NDST1P52848 882 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 EPHA5P54756 1037 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 MARSP56192 900 aaKnown RBP12.14□□□□□ -0.47
TMEM258-205ENST00000540434 NOP14P78316 857 aaKnown RBP12.14□□□□□ -0.47
TMEM258-205ENST00000540434 TSPY1Q01534 308 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 LRMPQ12912 555 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 GRM2Q14416 872 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 CCDC40Q4G0X9 1142 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 GAREM2Q75VX8 874 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 RTL10Q7L3V2 364 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 TMEM150AQ86TG1 271 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 ACOT1Q86TX2 421 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 DCP1BQ8IZD4 617 aaKnown RBP12.14□□□□□ -0.47
TMEM258-205ENST00000540434 C12orf29Q8N999 325 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 SHKBP1Q8TBC3 707 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 MYCBPAPQ8TBZ2 947 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 SPATA18Q8TC71 538 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 DNASE1L2Q92874 299 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 KAT5Q92993 513 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 IER2Q9BTL4 223 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 ZNF518BQ9C0D4 1074 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 ELOVL4Q9GZR5 314 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 SNX25Q9H3E2 840 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 SAMSN1Q9NSI8 373 aaKnown RBP12.14□□□□□ -0.47
TMEM258-205ENST00000540434 RBM12Q9NTZ6 932 aaKnown RBP12.14□□□□□ -0.47
TMEM258-205ENST00000540434 CDH9Q9ULB4 789 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 MAFFQ9ULX9 164 aa12.14□□□□□ -0.47
TMEM258-205ENST00000540434 R3HCC1Q9Y3T6 440 aaKnown RBP12.14□□□□□ -0.47
TMEM258-205ENST00000540434 BPTFQ12830 3046 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 A8MXQ7 604 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 MAN2B1O00754 1011 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 XYLBO75191 536 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 BEST1O76090 585 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 FAM163BP0C2L3 166 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 CHRNB1P11230 501 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 MYL4P12829 197 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 CD58P19256 250 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 FCARP24071 287 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 CNR2P34972 360 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 USP46P62068 366 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 KCNH2Q12809 1159 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 PPP2R5DQ14738 602 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 TEAD2Q15562 447 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 RNF43Q68DV7 783 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 LONP2Q86WA8 852 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 UBR7Q8N806 425 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 FBXL13Q8NEE6 735 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 SPPL2BQ8TCT7 592 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 TAF4BQ92750 862 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 PSMG2Q969U7 264 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 ELSPBP1Q96BH3 223 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 RSPRY1Q96DX4 576 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 CNOT6LQ96LI5 555 aaKnown RBP12.13□□□□□ -0.47
TMEM258-205ENST00000540434 ZNF512Q96ME7 567 aaPredicted RBP12.13□□□□□ -0.47
TMEM258-205ENST00000540434 AVENQ9NQS1 362 aaPredicted RBP12.13□□□□□ -0.47
TMEM258-205ENST00000540434 GDE1Q9NZC3 331 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 MRPS23Q9Y3D9 190 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms