RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 RBM15Q96T37 977 aaKnown RBP eCLIP9.06□□□□□ -0.963e-7■■□□□ 13.6
DDB1-217ENST00000540166 KLHL4Q9C0H6 718 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 TRPV6Q9H1D0 765 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 OCEL1Q9H607 264 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 JMJD4Q9H9V9 463 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 UBE2TQ9NPD8 197 aaPredicted RBP9.06□□□□□ -0.96
DDB1-217ENST00000540166 PTTG2Q9NZH5 202 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 CHORDC1Q9UHD1 332 aaPredicted RBP9.06□□□□□ -0.96
DDB1-217ENST00000540166 TRIM43BA6NCK2 446 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 EDF1O60869 148 aaKnown RBP9.05□□□□□ -0.96
DDB1-217ENST00000540166 FKBP6O75344 327 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 CSF2RAP15509 400 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 GM2AP17900 193 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 SOX5P35711 763 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 PSEN2P49810 448 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 MYL7Q01449 175 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 ECM1Q16610 540 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 COBLL1Q53SF7 1204 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 IZUMO3Q5VZ72 239 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 AADACL2Q6P093 401 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 C16orf87Q6PH81 154 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 ZDHHC24Q6UX98 284 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 SATL1Q86VE3 508 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 PALM2Q8IXS6 379 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 OR6Y1Q8NGX8 325 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 THAP2Q9H0W7 228 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 PCIF1Q9H4Z3 704 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 CERS4Q9HA82 394 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 ANLNQ9NQW6 1124 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 WHRNQ9P202 907 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 A0A1W2PPC1 479 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 DENND3A2RUS2 1198 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 PDXKO00764 312 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 CLDN3O15551 220 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 ALOX15P16050 662 aaPredicted RBP9.05□□□□□ -0.96
DDB1-217ENST00000540166 COMTP21964 271 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 FOXN2P32314 431 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 SSTR3P32745 418 aaPredicted RBP9.05□□□□□ -0.96
DDB1-217ENST00000540166 RPL5P46777 297 aaKnown RBP9.05□□□□□ -0.96
DDB1-217ENST00000540166 HPCAP84074 193 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 C16orf72Q14CZ0 275 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 ISLR2Q6UXK2 745 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 TSHZ1Q6ZSZ6 1077 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 TMPRSS6Q8IU80 811 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 PPM1KQ8N3J5 372 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 PRELID2Q8N945 189 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 SEPT1Q8WYJ6 367 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 COPS5Q92905 334 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 MRPL1Q9BYD6 325 aaKnown RBP9.05□□□□□ -0.96
DDB1-217ENST00000540166 CRISPLD2Q9H0B8 497 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 MAP3K20Q9NYL2 800 aaKnown RBP9.05□□□□□ -0.96
DDB1-217ENST00000540166 PRKAG3Q9UGI9 489 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 TTC7AQ9ULT0 858 aaPredicted RBP9.05□□□□□ -0.96
DDB1-217ENST00000540166 BARX2Q9UMQ3 279 aaPredicted RBP9.05□□□□□ -0.96
DDB1-217ENST00000540166 AKT3Q9Y243 479 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 ARHGEF35A5YM69 484 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 GOLGA8RI6L899 631 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 C2CD2LO14523 706 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 GAS7O60861 476 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 MED24O75448 989 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 AKAP3O75969 853 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 ASMTLO95671 621 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 SMPD1P17405 629 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 MAGEA4P43358 317 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 MFSD10Q14728 455 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 IER5Q5VY09 327 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 NCCRP1Q6ZVX7 275 aaPredicted RBP9.05□□□□□ -0.96
DDB1-217ENST00000540166 ZNF75CPQ92670 426 aaPredicted RBP9.05□□□□□ -0.96
DDB1-217ENST00000540166 SCLYQ96I15 445 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 ZSWIM1Q9BR11 485 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 MAF1Q9H063 256 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 PCDH18Q9HCL0 1135 aa9.05□□□□□ -0.96
DDB1-217ENST00000540166 ADAMTSL1Q8N6G6 1762 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 SOWAHBA6NEL2 793 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 RSPH10B2B2RC85 870 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 H3BRB1 525 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 LSM1O15116 133 aaKnown RBP9.04□□□□□ -0.96
DDB1-217ENST00000540166 SNAI1O95863 264 aaPredicted RBP9.04□□□□□ -0.96
DDB1-217ENST00000540166 RSPH10BP0C881 870 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 PYGMP11217 842 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 HARSP12081 509 aaKnown RBP9.04□□□□□ -0.96
DDB1-217ENST00000540166 NMT1P30419 496 aaKnown RBP9.04□□□□□ -0.96
DDB1-217ENST00000540166 GJA9P57773 515 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 PDK4Q16654 411 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 TMEM119Q4V9L6 283 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 IRF2BP2Q7Z5L9 587 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 SIAH1Q8IUQ4 282 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 PHC3Q8NDX5 983 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 ARNTL2Q8WYA1 636 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 SEC14L1Q92503 715 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 GATA6Q92908 595 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 ART4Q93070 314 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 FAM81BQ96LP2 452 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 HAUS8Q9BT25 410 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 NUF2Q9BZD4 464 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 GRIP2Q9C0E4 1043 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 TUT1Q9H6E5 874 aaKnown RBP9.04□□□□□ -0.96
DDB1-217ENST00000540166 RIOX1Q9H6W3 641 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 MANSC1Q9H8J5 431 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 TIMMDC1Q9NPL8 285 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms