RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 CUL2Q13617 745 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 KRT31Q15323 416 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 C1orf220Q5T0J3 134 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 CYP4A22Q5TCH4 519 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 CDKAL1Q5VV42 579 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 SPOPLQ6IQ16 392 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 ANKRD54Q6NXT1 300 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 CD300LGQ6UXG3 332 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 TMEM184AQ6ZMB5 413 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 LRRC69Q6ZNQ3 347 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 CACNA2D4Q7Z3S7 1137 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 ADGRD2Q7Z7M1 963 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 LUZP1Q86V48 1076 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 B3GALNT2Q8NCR0 500 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 NEK11Q8NG66 645 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 SLC7A14Q8TBB6 771 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 FUBP3Q96I24 572 aaKnown RBP eCLIP6.88□□□□□ -1.31
SNHG1-212ENST00000539975 FAM84AQ96KN4 292 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 NECTIN4Q96NY8 510 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 PGLYRP2Q96PD5 576 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 SEPT5Q99719 369 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-212ENST00000539975 CRACR2AQ9BSW2 395 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 INTS2Q9H0H0 1204 aaKnown RBP6.88□□□□□ -1.31
SNHG1-212ENST00000539975 ZCWPW1Q9H0M4 648 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 PDCL3Q9H2J4 239 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 UBE2ZQ9H832 354 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-212ENST00000539975 CBX8Q9HC52 389 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 ABCB6Q9NP58 842 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 UBE2TQ9NPD8 197 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-212ENST00000539975 AVENQ9NQS1 362 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-212ENST00000539975 CISHQ9NSE2 258 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 ABI2Q9NYB9 513 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-212ENST00000539975 THEGQ9P2T0 379 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 HSFX1Q9UBD0 423 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 HESX1Q9UBX0 185 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 LIMA1Q9UHB6 759 aaKnown RBP6.88□□□□□ -1.31
SNHG1-212ENST00000539975 CD207Q9UJ71 328 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 GTF3C4Q9UKN8 822 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 DAAM1Q9Y4D1 1078 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 PCDHB4Q9Y5E5 795 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 WDR27A2RRH5 827 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 LRRC10BA6NIK2 292 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 ZNF197O14709 1029 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 GABRDO14764 452 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 MED7O43513 233 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 ABLIM3O94929 683 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 FGF19O95750 216 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 OR4Q2P0C623 313 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 ARAFP10398 606 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 CD19P15391 556 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 EPCAMP16422 314 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 PTPN2P17706 415 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 IGFBP6P24592 240 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-212ENST00000539975 HOXA9P31269 272 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 GTF2F1P35269 517 aaKnown RBP eCLIP6.87□□□□□ -1.31
SNHG1-212ENST00000539975 MTHFRP42898 656 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 ASPAP45381 313 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 RAP1GAPP47736 663 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 NDST1P52848 882 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 UBASH3AP57075 661 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 SNX16P57768 344 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 BPIFB4P59827 614 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 ZNF445P59923 1031 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 PSMC1P62191 440 aaKnown RBP6.87□□□□□ -1.31
SNHG1-212ENST00000539975 MRPS5P82675 430 aaKnown RBP6.87□□□□□ -1.31
SNHG1-212ENST00000539975 DUSP4Q13115 394 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 RAPGEF1Q13905 1077 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 SYCP1Q15431 976 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 STILQ15468 1287 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 ARHGAP44Q17R89 818 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 ZNF394Q53GI3 561 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 MDH1BQ5I0G3 518 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 RARS2Q5T160 578 aaKnown RBP6.87□□□□□ -1.31
SNHG1-212ENST00000539975 TRIM65Q6PJ69 517 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 LYPD4Q6UWN0 246 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 VSTM1Q6UX27 236 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 RRAGAQ7L523 313 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 ACOT1Q86TX2 421 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 IRF2BP1Q8IU81 584 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 SCN4BQ8IWT1 228 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 DHX40Q8IX18 779 aaKnown RBP6.87□□□□□ -1.31
SNHG1-212ENST00000539975 TCEAL8Q8IYN2 117 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 GOLGA6L1Q8N7Z2 621 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 LEMD2Q8NC56 503 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 ZNF397Q8NF99 534 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-212ENST00000539975 CXorf38Q8TB03 319 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 MYCBPAPQ8TBZ2 947 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 WHAMMQ8TF30 809 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 SLC22A17Q8WUG5 538 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 ATXN2LQ8WWM7 1075 aaKnown RBP6.87□□□□□ -1.31
SNHG1-212ENST00000539975 SMG7Q92540 1137 aaKnown RBP6.87□□□□□ -1.31
SNHG1-212ENST00000539975 SEMA4DQ92854 862 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 COL26A1Q96A83 441 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 ACSF2Q96CM8 615 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-212ENST00000539975 TMEM176AQ96HP8 235 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 GCNAQ96QF7 691 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 SPAG5Q96R06 1193 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 MED15Q96RN5 788 aa6.87□□□□□ -1.31
SNHG1-212ENST00000539975 MRPL45Q9BRJ2 306 aaKnown RBP6.87□□□□□ -1.31
SNHG1-212ENST00000539975 FUCA2Q9BTY2 467 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms