RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 CALUO43852 315 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-211ENST00000539843 TGM1P22735 817 aa16.26■□□□□ 0.19
UBE3B-211ENST00000539843 CASP1P29466 404 aa16.26■□□□□ 0.19
UBE3B-211ENST00000539843 PXNP49023 591 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-211ENST00000539843 KRT85P78386 507 aa16.26■□□□□ 0.19
UBE3B-211ENST00000539843 DNM1Q05193 864 aaKnown RBP16.26■□□□□ 0.19
UBE3B-211ENST00000539843 TAF10Q12962 218 aa16.26■□□□□ 0.19
UBE3B-211ENST00000539843 DMC1Q14565 340 aa16.26■□□□□ 0.19
UBE3B-211ENST00000539843 NUDT18Q6ZVK8 323 aa16.26■□□□□ 0.19
UBE3B-211ENST00000539843 CCDC150Q8NCX0 1101 aa16.26■□□□□ 0.19
UBE3B-211ENST00000539843 RIN3Q8TB24 985 aa16.26■□□□□ 0.19
UBE3B-211ENST00000539843 SMARCD1Q96GM5 515 aa16.26■□□□□ 0.19
UBE3B-211ENST00000539843 ZNF518BQ9C0D4 1074 aa16.26■□□□□ 0.19
UBE3B-211ENST00000539843 DMAP1Q9NPF5 467 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-211ENST00000539843 C2orf42Q9NWW7 574 aa16.26■□□□□ 0.19
UBE3B-211ENST00000539843 SERTAD1Q9UHV2 236 aa16.26■□□□□ 0.19
UBE3B-211ENST00000539843 ATP6V1DQ9Y5K8 247 aa16.26■□□□□ 0.19
UBE3B-211ENST00000539843 ZNF638Q14966 1978 aaKnown RBP16.26■□□□□ 0.19
UBE3B-211ENST00000539843 KIF26AQ9ULI4 1882 aaPredicted RBP16.25■□□□□ 0.19
UBE3B-211ENST00000539843 DCDC2BA2VCK2 349 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 PDXKO00764 312 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 ALDH1A2O94788 518 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 EPN2O95208 641 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 RPN1P04843 607 aaKnown RBP16.25■□□□□ 0.19
UBE3B-211ENST00000539843 USP46P62068 366 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 SGSM1Q2NKQ1 1148 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 PKN3Q6P5Z2 889 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 SCARA5Q6ZMJ2 495 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 FILIP1Q7Z7B0 1213 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 SLC9A9Q8IVB4 645 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 TAF4BQ92750 862 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 SPATA32Q96LK8 384 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 ARRDC1-AS1Q9H2J1 176 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 DPEP3Q9H4B8 488 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 COMMD8Q9NX08 183 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 SMPD4Q9NXE4 827 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 RCOR1Q9UKL0 485 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 SH3BP1Q9Y3L3 701 aa16.25■□□□□ 0.19
UBE3B-211ENST00000539843 LRRIQ3A6PVS8 624 aaPredicted RBP16.24■□□□□ 0.19
UBE3B-211ENST00000539843 OAS1P00973 400 aaKnown RBP16.24■□□□□ 0.19
UBE3B-211ENST00000539843 NR3C1P04150 777 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 APODP05090 189 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 KCNA4P22459 653 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 GBP1P32455 592 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 EIF2DP41214 584 aaKnown RBP16.24■□□□□ 0.19
UBE3B-211ENST00000539843 DGKEP52429 567 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 GOLGA8FQ08AF8 430 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 GOLGA8DPQ0D2H9 430 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 KMT5BQ4FZB7 885 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 USP39Q53GS9 565 aaKnown RBP16.24■□□□□ 0.19
UBE3B-211ENST00000539843 HECTD3Q5T447 861 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 BTBD8Q5XKL5 378 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 CEP135Q66GS9 1140 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 FAM35AQ86V20 835 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 SPRYD3Q8NCJ5 442 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 PARD3BQ8TEW8 1205 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 ZNF516Q92618 1163 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 OTUB2Q96DC9 234 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 PAGE5Q96GU1 130 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 B3GNT5Q9BYG0 378 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 XYLT2Q9H1B5 865 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 SMYD3Q9H7B4 428 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 FBRSL1Q9HCM7 1045 aaKnown RBP16.24■□□□□ 0.19
UBE3B-211ENST00000539843 CFAP97Q9P2B7 532 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 EBF1Q9UH73 591 aa16.24■□□□□ 0.19
UBE3B-211ENST00000539843 DENND4CQ5VZ89 1909 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 CLDN5O00501 218 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 AP1G2O75843 785 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 OLFM2O95897 454 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 ZNF806P0C7X5 589 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 KRT13P13646 458 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 PFKFB1P16118 471 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 CMA1P23946 247 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 PIK3CAP42336 1068 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 CASP4P49662 377 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 MRPS21P82921 87 aaKnown RBP16.23■□□□□ 0.19
UBE3B-211ENST00000539843 STK4Q13043 487 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 HSF5Q4G112 596 aaPredicted RBP16.23■□□□□ 0.19
UBE3B-211ENST00000539843 KBTBD6Q86V97 674 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 UNC93AQ86WB7 457 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 GRAMD1CQ8IYS0 662 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 ZC3H10Q96K80 434 aaKnown RBP16.23■□□□□ 0.19
UBE3B-211ENST00000539843 PNKPQ96T60 521 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 LINC00597Q9H2U6 94 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 FBXO44Q9H4M3 255 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 VPS45Q9NRW7 570 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 KRT82Q9NSB4 513 aa16.23■□□□□ 0.19
UBE3B-211ENST00000539843 OBSL1O75147 1896 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 A0A1B0GVL5 298 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 E2F8A0AVK6 867 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 IKBKBO14920 756 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 ACTN4O43707 911 aaKnown RBP16.22■□□□□ 0.19
UBE3B-211ENST00000539843 CYP17A1P05093 508 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 ADH5P11766 374 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 RPL13P26373 211 aaKnown RBP16.22■□□□□ 0.19
UBE3B-211ENST00000539843 SYKP43405 635 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 TUBP50607 506 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 SLC5A3P53794 718 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 SEC13P55735 322 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 CLDN10P78369 228 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms