RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 K7EQS6 105 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 KIAA0391O15091 583 aaKnown RBP15.97■□□□□ 0.15
USB1-203ENST00000539737 AKAP3O75969 853 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 NOL4O94818 638 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 PRR29P0C7W0 189 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 MAPK8P45983 427 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 UBE2HP62256 183 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 DPYDQ12882 1025 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 PDGFRLQ15198 375 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 KMT5BQ4FZB7 885 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 INTS6LQ5JSJ4 861 aaKnown RBP15.97■□□□□ 0.15
USB1-203ENST00000539737 EMC10Q5UCC4 262 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 PMS2CLQ68D20 193 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 TMEM92Q6UXU6 159 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 C12orf40Q86WS4 652 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 NT5DC4Q86YG4 428 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 DCP1BQ8IZD4 617 aaKnown RBP15.97■□□□□ 0.15
USB1-203ENST00000539737 C1orf127Q8N9H9 656 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 GLIS3Q8NEA6 775 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 ZNF507Q8TCN5 953 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 USP33Q8TEY7 942 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 SCNM1Q9BWG6 230 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 ADAM33Q9BZ11 813 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 SLC39A2Q9NP94 309 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 GCNT4Q9P109 453 aa15.97■□□□□ 0.15
USB1-203ENST00000539737 PTPRJQ12913 1337 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 TRAV19A0A0A6YYK7 116 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 SPAARA0A1B0GVQ0 90 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 HYAL3O43820 417 aaPredicted RBP15.96■□□□□ 0.15
USB1-203ENST00000539737 RHOBTB1O94844 696 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 RHOBTB3O94955 611 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 KIF20AO95235 890 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 SNRPFP62306 86 aaKnown RBP15.96■□□□□ 0.15
USB1-203ENST00000539737 TSPY1Q01534 308 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 KCNB1Q14721 858 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 SV2CQ496J9 727 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 CLEC17AQ6ZS10 378 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 HS2ST1Q7LGA3 356 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 CYP2U1Q7Z449 544 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 TMEFF1Q8IYR6 380 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 OR2I1PQ8NGU4 316 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 CXorf38Q8TB03 319 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 C2orf15Q8WU43 125 aaKnown RBP15.96■□□□□ 0.15
USB1-203ENST00000539737 CACTINQ8WUQ7 758 aaKnown RBP15.96■□□□□ 0.15
USB1-203ENST00000539737 SCFD1Q8WVM8 642 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 KIF9Q9HAQ2 790 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 TMEM74BQ9NUR3 256 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 RMND1Q9NWS8 449 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 SMPD4Q9NXE4 827 aa15.96■□□□□ 0.15
USB1-203ENST00000539737 CGNQ9P2M7 1197 aaKnown RBP15.96■□□□□ 0.15
USB1-203ENST00000539737 TNRC6BQ9UPQ9 1833 aaKnown RBP15.96■□□□□ 0.14
USB1-203ENST00000539737 CELSR3Q9NYQ7 3312 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 GADD45BO75293 160 aaPredicted RBP15.95■□□□□ 0.14
USB1-203ENST00000539737 SMC2O95347 1197 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 KRT19P08727 400 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 CSH1P0DML2 217 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 CSH2P0DML3 217 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 LMO2P25791 158 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 DDX6P26196 483 aaKnown RBP eCLIP15.95■□□□□ 0.14
USB1-203ENST00000539737 PTGER3P43115 390 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 KDSRQ06136 332 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 ELOA2Q8IYF1 753 aaPredicted RBP15.95■□□□□ 0.14
USB1-203ENST00000539737 ALLCQ8N6M5 410 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 GOLGA5Q8TBA6 731 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 GATA6Q92908 595 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 MYLPFQ96A32 169 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 ZNF560Q96MR9 790 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 GBP4Q96PP9 640 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 PCIF1Q9H4Z3 704 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 TMEM9BQ9NQ34 198 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 EBF1Q9UH73 591 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 MBD1Q9UIS9 605 aaPredicted RBP15.95■□□□□ 0.14
USB1-203ENST00000539737 SIX4Q9UIU6 781 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 KLK13Q9UKR3 277 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 NME7Q9Y5B8 376 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 SNX9Q9Y5X1 595 aa15.95■□□□□ 0.14
USB1-203ENST00000539737 ANKRD11Q6UB99 2663 aaPredicted RBP15.95■□□□□ 0.14
USB1-203ENST00000539737 PI4KAP42356 2102 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 NBEAQ8NFP9 2946 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 SGK1O00141 431 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 KHNYNO15037 678 aaKnown RBP15.94■□□□□ 0.14
USB1-203ENST00000539737 USP17L7P0C7H9 530 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 CHRM1P11229 460 aaPredicted RBP15.94■□□□□ 0.14
USB1-203ENST00000539737 PNPLA4P41247 253 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 CACNA2D1P54289 1103 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 SMARCB1Q12824 385 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 STK4Q13043 487 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 PNOCQ13519 176 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 ZNF268Q14587 947 aaPredicted RBP15.94■□□□□ 0.14
USB1-203ENST00000539737 KNOP1Q1ED39 458 aaKnown RBP15.94■□□□□ 0.14
USB1-203ENST00000539737 FILIP1Q7Z7B0 1213 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 SPATA2LQ8IUW3 424 aaPredicted RBP15.94■□□□□ 0.14
USB1-203ENST00000539737 NELFCDQ8IXH7 590 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 KIAA0895Q8NCT3 520 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 FNBP1Q96RU3 617 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 CBWD1Q9BRT8 395 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 GTPBP4Q9BZE4 634 aaKnown RBP15.94■□□□□ 0.14
USB1-203ENST00000539737 MTMR12Q9C0I1 747 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 PDE11AQ9HCR9 933 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms