RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 ACBD6Q9BR61 282 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 CCSER1Q9C0I3 900 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 GAREM1Q9H706 876 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 DPP3Q9NY33 737 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 KNTC1P50748 2209 aa12.91□□□□□ -0.34
YBX3-207ENST00000539204 HECTD1Q9ULT8 2610 aa12.91□□□□□ -0.34
YBX3-207ENST00000539204 H0YCG3 227 aa12.91□□□□□ -0.34
YBX3-207ENST00000539204 RRP8O43159 456 aaKnown RBP12.91□□□□□ -0.34
YBX3-207ENST00000539204 FAM189A1O60320 539 aa12.91□□□□□ -0.34
YBX3-207ENST00000539204 CER1O95813 267 aa12.91□□□□□ -0.34
YBX3-207ENST00000539204 ADH5P11766 374 aa12.91□□□□□ -0.34
YBX3-207ENST00000539204 GUCY2CP25092 1073 aa12.91□□□□□ -0.34
YBX3-207ENST00000539204 NTSR1P30989 418 aa12.91□□□□□ -0.34
YBX3-207ENST00000539204 EIF2S3P41091 472 aaKnown RBP12.91□□□□□ -0.34
YBX3-207ENST00000539204 RAD51AP2Q09MP3 1159 aa12.91□□□□□ -0.34
YBX3-207ENST00000539204 SMAD1Q15797 465 aaKnown RBP12.91□□□□□ -0.34
YBX3-207ENST00000539204 SNX29Q8TEQ0 813 aa12.91□□□□□ -0.34
YBX3-207ENST00000539204 FCRL3Q96P31 734 aaPredicted RBP12.91□□□□□ -0.34
YBX3-207ENST00000539204 MSTO1Q9BUK6 570 aa12.91□□□□□ -0.34
YBX3-207ENST00000539204 ASB7Q9H672 318 aa12.91□□□□□ -0.34
YBX3-207ENST00000539204 IL21RQ9HBE5 538 aa12.91□□□□□ -0.34
YBX3-207ENST00000539204 TRPM5Q9NZQ8 1165 aa12.91□□□□□ -0.34
YBX3-207ENST00000539204 CPSF3Q9UKF6 684 aaKnown RBP12.91□□□□□ -0.34
YBX3-207ENST00000539204 GTF3C4Q9UKN8 822 aa12.91□□□□□ -0.34
YBX3-207ENST00000539204 PCDHGB2Q9Y5G2 931 aa12.91□□□□□ -0.34
YBX3-207ENST00000539204 MYO18AQ92614 2054 aaKnown RBP12.91□□□□□ -0.34
YBX3-207ENST00000539204 TEX51A0A1B0GUA7 166 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 A0A1W2PQF6 199 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 HNRNPDLO14979 420 aaKnown RBP12.9□□□□□ -0.34
YBX3-207ENST00000539204 FLRT2O43155 660 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 ARHGAP6O43182 974 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 CILPO75339 1184 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 CDC25AP30304 524 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 MATKP42679 507 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 WASP42768 502 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 SLC7A9P82251 487 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 GAD2Q05329 585 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 HLA-BQ31612 363 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 SV2CQ496J9 727 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 KRT79Q5XKE5 535 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 BTBD8Q5XKL5 378 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 GPR155Q7Z3F1 870 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 SPATA2LQ8IUW3 424 aaPredicted RBP12.9□□□□□ -0.34
YBX3-207ENST00000539204 NAT16Q8N8M0 369 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 DNASE2BQ8WZ79 361 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 RAB34Q9BZG1 259 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 RNF38Q9H0F5 515 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 CLMPQ9H6B4 373 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 TBC1D14Q9P2M4 693 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 DEC1Q9P2X7 70 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 C2CD2Q9Y426 696 aa12.9□□□□□ -0.34
YBX3-207ENST00000539204 OBSL1O75147 1896 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 SPTA1P02549 2419 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 A0A0B4J269 797 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 MEI4A8MW99 385 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 PLK4O00444 970 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 SCAMP3O14828 347 aaKnown RBP12.89□□□□□ -0.35
YBX3-207ENST00000539204 TNFSF14O43557 240 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 NDUFV2P19404 249 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 PPP3CCP48454 512 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 FOSBP53539 338 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 MYL7Q01449 175 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 KCNC4Q03721 635 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 CFAP221Q4G0U5 840 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 CCDC157Q569K6 752 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 LY6G5CQ5SRR4 150 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 C10orf76Q5T2E6 689 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 TMPRSS12Q86WS5 348 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 SKAP1Q86WV1 359 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 LURAP1LQ8IV03 231 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 PHTF2Q8N3S3 785 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 IPO4Q8TEX9 1081 aaKnown RBP12.89□□□□□ -0.35
YBX3-207ENST00000539204 MIR1-1HGQ9H1L0 117 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 SMPD4Q9NXE4 827 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 DDX43Q9NXZ2 648 aaKnown RBP12.89□□□□□ -0.35
YBX3-207ENST00000539204 CFAP97Q9P2B7 532 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 LARSQ9P2J5 1176 aaKnown RBP12.89□□□□□ -0.35
YBX3-207ENST00000539204 STARD13Q9Y3M8 1113 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 NFE2L3Q9Y4A8 694 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 CPQQ9Y646 472 aa12.89□□□□□ -0.35
YBX3-207ENST00000539204 HELZP42694 1942 aaKnown RBP12.88□□□□□ -0.35
YBX3-207ENST00000539204 HUS1O60921 280 aa12.88□□□□□ -0.35
YBX3-207ENST00000539204 ABL1P00519 1130 aa12.88□□□□□ -0.35
YBX3-207ENST00000539204 ACAT1P24752 427 aaKnown RBP12.88□□□□□ -0.35
YBX3-207ENST00000539204 CD6P30203 668 aa12.88□□□□□ -0.35
YBX3-207ENST00000539204 PNPLA4P41247 253 aa12.88□□□□□ -0.35
YBX3-207ENST00000539204 ACOT2P49753 483 aa12.88□□□□□ -0.35
YBX3-207ENST00000539204 INTS6LQ5JSJ4 861 aaKnown RBP12.88□□□□□ -0.35
YBX3-207ENST00000539204 DDX42Q86XP3 938 aaKnown RBP eCLIP12.88□□□□□ -0.35
YBX3-207ENST00000539204 CHPFQ8IZ52 775 aa12.88□□□□□ -0.35
YBX3-207ENST00000539204 PDCL2Q8N4E4 241 aa12.88□□□□□ -0.35
YBX3-207ENST00000539204 ZCCHC9Q8N567 271 aaKnown RBP12.88□□□□□ -0.35
YBX3-207ENST00000539204 IGSF22Q8N9C0 903 aa12.88□□□□□ -0.35
YBX3-207ENST00000539204 ENGASEQ8NFI3 743 aa12.88□□□□□ -0.35
YBX3-207ENST00000539204 ERLEC1Q96DZ1 483 aa12.88□□□□□ -0.35
YBX3-207ENST00000539204 FUBP3Q96I24 572 aaKnown RBP eCLIP12.88□□□□□ -0.35
YBX3-207ENST00000539204 EHD2Q9NZN4 543 aa12.88□□□□□ -0.35
YBX3-207ENST00000539204 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.88□□□□□ -0.35
YBX3-207ENST00000539204 FNDC3AQ9Y2H6 1198 aaKnown RBP12.88□□□□□ -0.35
YBX3-207ENST00000539204 AK5Q9Y6K8 562 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms