RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 CETN3O15182 167 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 NR3C1P04150 777 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 ENGP17813 658 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 CDK11BP21127 795 aaKnown RBP13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 NR2F2P24468 414 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 GJA4P35212 333 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 MAPK8P45983 427 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 CYP2J2P51589 502 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 YARSP54577 528 aaKnown RBP13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 FKBP3Q00688 224 aaKnown RBP13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 YWHAHQ04917 246 aaPredicted RBP13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 EDRF1Q3B7T1 1238 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 ZNF568Q3ZCX4 644 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 ARHGAP15Q53QZ3 475 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 SPATA1Q5VX52 437 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 CEP135Q66GS9 1140 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 ANKRD40Q6AI12 368 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 ZPBP2Q6X784 338 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 TAS1R3Q7RTX0 852 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 TMEM150AQ86TG1 271 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 CMTM8Q8IZV2 173 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 ANKRD20A12PQ8NF67 263 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 ENOX1Q8TC92 643 aaKnown RBP13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 USP13Q92995 863 aaPredicted RBP13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 OXCT2Q9BYC2 517 aaPredicted RBP13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 TPSD1Q9BZJ3 242 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 KCTD10Q9H3F6 313 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 AGPAT3Q9NRZ7 376 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 MBD1Q9UIS9 605 aaPredicted RBP13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 TRAF3IP3Q9Y228 551 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 FRMD4BQ9Y2L6 1034 aa13.37□□□□□ -0.27
CLSTN3-208ENST00000538933 MGAQ8IWI9 3026 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 ANTXRLA6NF34 631 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 IKBKBO14920 756 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 CLDN3O15551 220 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 EXOC3O60645 756 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 PROZP22891 400 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 DHPSP49366 369 aaPredicted RBP13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 AARSP49588 968 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 PMS1P54277 932 aaKnown RBP13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 ADAM9Q13443 819 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 SLC10A6Q3KNW5 377 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 CCDC40Q4G0X9 1142 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 TTI2Q6NXR4 508 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 SLC23A3Q6PIS1 610 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 LUZP1Q86V48 1076 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 HNRNPLLQ8WVV9 542 aaKnown RBP13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 KCNN1Q92952 543 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 CNOT6LQ96LI5 555 aaKnown RBP13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 ACAP3Q96P50 834 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 FNBP1Q96RU3 617 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 MSTO1Q9BUK6 570 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 SRRTQ9BXP5 876 aaKnown RBP13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 PCIF1Q9H4Z3 704 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 HSFX1Q9UBD0 423 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 TUBGCP4Q9UGJ1 667 aa13.36□□□□□ -0.27
CLSTN3-208ENST00000538933 MYO18BQ8IUG5 2567 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 TSC2P49815 1807 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 GOLGA6L3A6NEY3 463 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 OR6C75A6NL08 312 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 ANKRD63C9JTQ0 380 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 TNFRSF10BO14763 440 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 KIAA0391O15091 583 aaKnown RBP13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 TOM1L1O75674 476 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 PIGRP01833 764 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 TPM2P07951 284 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 EPB41P11171 864 aaKnown RBP13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 ATF6P18850 670 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 GARTP22102 1010 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 HOXD13P35453 343 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 PTGER3P43115 390 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 AMPD2Q01433 879 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 MYBPC2Q14324 1141 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 NOLC1Q14978 699 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 ZNF423Q2M1K9 1284 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 PEAR1Q5VY43 1037 aaPredicted RBP13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 FOXR2Q6PJQ5 311 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 MPZL3Q6UWV2 235 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 CCNI2Q6ZMN8 369 aaPredicted RBP13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 ITIH5Q86UX2 942 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 SYT12Q8IV01 421 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 FRMD1Q8N878 549 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 TSTD1Q8NFU3 115 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 ACDQ96AP0 544 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 CEP63Q96MT8 703 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 NUSAP1Q9BXS6 441 aaKnown RBP13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 SCUBE2Q9NQ36 999 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 HSPBP1Q9NZL4 362 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 HECTD1Q9ULT8 2610 aa13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 HELZP42694 1942 aaKnown RBP13.35□□□□□ -0.27
CLSTN3-208ENST00000538933 TISP43B9A030 160 aa13.34□□□□□ -0.27
CLSTN3-208ENST00000538933 TGFB1I1O43294 461 aa13.34□□□□□ -0.27
CLSTN3-208ENST00000538933 GNA14O95837 355 aa13.34□□□□□ -0.27
CLSTN3-208ENST00000538933 LDHAP00338 332 aaKnown RBP13.34□□□□□ -0.27
CLSTN3-208ENST00000538933 CD59P13987 128 aa13.34□□□□□ -0.27
CLSTN3-208ENST00000538933 HNRNPLP14866 589 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLSTN3-208ENST00000538933 CDC25CP30307 473 aa13.34□□□□□ -0.27
CLSTN3-208ENST00000538933 MTIF2P46199 727 aaKnown RBP13.34□□□□□ -0.27
CLSTN3-208ENST00000538933 SPAG1Q07617 926 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms