RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 CELF4Q9BZC1 486 aaKnown RBP17.41■□□□□ 0.38
SCARB1-205ENST00000538291 CIPCQ9C0C6 399 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 YIPF3Q9GZM5 350 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 ISCUQ9H1K1 167 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 DEAF1O75398 565 aaPredicted RBP17.4■□□□□ 0.38
SCARB1-205ENST00000538291 SUPT7LO94864 414 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 TRPC1P48995 793 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 METTL7BQ6UX53 244 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 ERP27Q96DN0 273 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 SCN3BQ9NY72 215 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 MPP6Q9NZW5 540 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 LNPEPQ9UIQ6 1025 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 TCN1P20061 433 aaPredicted RBP17.4■□□□□ 0.38
SCARB1-205ENST00000538291 S100A5P33763 92 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 CCZ1BP86790 482 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 CCZ1P86791 482 aaPredicted RBP17.4■□□□□ 0.38
SCARB1-205ENST00000538291 FAXCQ5TGI0 409 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 DEFB132Q7Z7B7 95 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 C10orf53Q8N6V4 93 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 FAM172AQ8WUF8 416 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 CPB2Q96IY4 423 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 WDR41Q9HAD4 459 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 PXMP2Q9NR77 195 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 MAPK1P28482 360 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 GPC1P35052 558 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 LAYNQ6UX15 382 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 PDLIM2Q96JY6 352 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 CYP3A43Q9HB55 503 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 PPP1R3GB7ZBB8 358 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 CRTAMO95727 393 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 UBE3AQ05086 875 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 DYNC1I2Q13409 638 aaKnown RBP17.4■□□□□ 0.38
SCARB1-205ENST00000538291 KBTBD12Q3ZCT8 623 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 ARMC2Q8NEN0 867 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 ZNF473Q8WTR7 871 aaKnown RBP17.4■□□□□ 0.38
SCARB1-205ENST00000538291 ILKAPQ9H0C8 392 aaPredicted RBP17.4■□□□□ 0.38
SCARB1-205ENST00000538291 SMARCAL1Q9NZC9 954 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 B2RBV5 119 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 FOXN3O00409 490 aaPredicted RBP17.4■□□□□ 0.38
SCARB1-205ENST00000538291 SGPL1O95470 568 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 NAA30Q147X3 362 aaPredicted RBP17.4■□□□□ 0.38
SCARB1-205ENST00000538291 DNERQ8NFT8 737 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 OR2W6PQ8NHA6 318 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 TMC2Q8TDI7 906 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 CDK5RAP1Q96SZ6 601 aaKnown RBP17.4■□□□□ 0.38
SCARB1-205ENST00000538291 EXOSC4Q9NPD3 245 aaKnown RBP17.4■□□□□ 0.38
SCARB1-205ENST00000538291 DYRK1BQ9Y463 629 aa17.4■□□□□ 0.38
SCARB1-205ENST00000538291 TIMM44O43615 452 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 ADCY3O60266 1144 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 CAND2O75155 1236 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 ACADMP11310 421 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 RAB27AP51159 221 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 WDR49Q8IV35 697 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 TEX9Q8N6V9 391 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 THAP11Q96EK4 314 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 FAR2Q96K12 515 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 CCT8L2Q96SF2 557 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 ZNF229Q9UJW7 825 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 CDC42BPBQ9Y5S2 1711 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 SDR42E2A6NKP2 422 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 H3BRB1 525 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 MAP3K7CLP57077 242 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 ANKS6Q68DC2 871 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 BTNL9Q6UXG8 535 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 DEFB128Q7Z7B8 93 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 HOMEZQ8IX15 550 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 FAM9CQ8IZT9 166 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 TPCN2Q8NHX9 752 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 TUT1Q9H6E5 874 aaKnown RBP17.39■□□□□ 0.37
SCARB1-205ENST00000538291 APPL1Q9UKG1 709 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 DRG1Q9Y295 367 aaKnown RBP17.39■□□□□ 0.37
SCARB1-205ENST00000538291 PHF20L1A8MW92 1017 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 GLRA3O75311 464 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 DAB1O75553 588 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 DGKIO75912 1065 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 PON1P27169 355 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 ATXN3P54252 364 aaPredicted RBP17.39■□□□□ 0.37
SCARB1-205ENST00000538291 STX5Q13190 355 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 INTS5Q6P9B9 1019 aaKnown RBP17.39■□□□□ 0.37
SCARB1-205ENST00000538291 ZNF438Q7Z4V0 828 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 LRRC6Q86X45 466 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 TUBGCP3Q96CW5 907 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 THUMPD3Q9BV44 507 aaKnown RBP17.39■□□□□ 0.37
SCARB1-205ENST00000538291 A0A087WZ62 844 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 ENDOD1O94919 500 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 PRPF39Q86UA1 669 aaKnown RBP17.39■□□□□ 0.37
SCARB1-205ENST00000538291 TRIM69Q86WT6 500 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 HASPINQ8TF76 798 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 FDXACB1Q9BRP7 624 aaPredicted RBP17.39■□□□□ 0.37
SCARB1-205ENST00000538291 NAT9Q9BTE0 207 aa17.39■□□□□ 0.37
SCARB1-205ENST00000538291 MYL4P12829 197 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 NBPF12Q5TAG4 269 aaPredicted RBP17.38■□□□□ 0.37
SCARB1-205ENST00000538291 MTG1Q9BT17 334 aaPredicted RBP17.38■□□□□ 0.37
SCARB1-205ENST00000538291 ADGRE3Q9BY15 652 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 LRRC40Q9H9A6 602 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 PDGFCQ9NRA1 345 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 RGL2O15211 777 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 LRRC36Q1X8D7 754 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 C4orf19Q8IY42 314 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 OSMRQ99650 979 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms