RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 TTC30AQ86WT1 665 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 SUGP1Q8IWZ8 645 aaKnown RBP8.91□□□□□ -0.98
SPARC-208ENST00000538026 CCDC105Q8IYK2 499 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 NUP93Q8N1F7 819 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 ARL14EPQ8N8R7 260 aaPredicted RBP8.91□□□□□ -0.98
SPARC-208ENST00000538026 MLKLQ8NB16 471 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 EHBP1Q8NDI1 1231 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 TTC8Q8TAM2 541 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 DEPDC1BQ8WUY9 529 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 TFAP2BQ92481 460 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 CYFIP2Q96F07 1278 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 FAXDC2Q96IV6 333 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 TNIP3Q96KP6 325 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 ZFRQ96KR1 1074 aaKnown RBP8.91□□□□□ -0.98
SPARC-208ENST00000538026 NT5C1AQ9BXI3 368 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 NUP62CLQ9H1M0 184 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 LINC00597Q9H2U6 94 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 BRD9Q9H8M2 597 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 NMUR1Q9HB89 426 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 KRT82Q9NSB4 513 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 OBP2AQ9NY56 170 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 GTSE1Q9NYZ3 720 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 AJAP1Q9UKB5 411 aaPredicted RBP8.91□□□□□ -0.98
SPARC-208ENST00000538026 ARIH1Q9Y4X5 557 aaPredicted RBP8.91□□□□□ -0.98
SPARC-208ENST00000538026 KANSL1LA0AUZ9 987 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 BICDL2A1A5D9 508 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 ANTXRLA6NF34 631 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 SOBPA7XYQ1 873 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 ZNF263O14978 683 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 GALR2O43603 387 aaPredicted RBP8.9□□□□□ -0.98
SPARC-208ENST00000538026 STX10O60499 249 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 GREM1O60565 184 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 TBX18O95935 607 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 ARSAP15289 507 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 DDX6P26196 483 aaKnown RBP eCLIP8.9□□□□□ -0.98
SPARC-208ENST00000538026 ADORA2BP29275 332 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 ZNF132P52740 706 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 SLC5A3P53794 718 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 PRKCQQ04759 706 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 ZNF268Q14587 947 aaPredicted RBP8.9□□□□□ -0.98
SPARC-208ENST00000538026 TAF12Q16514 161 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 GAB4Q2WGN9 574 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 CCDC40Q4G0X9 1142 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 PKDCCQ504Y2 493 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 ARHGAP15Q53QZ3 475 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 SNX30Q5VWJ9 437 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 ARHGAP17Q68EM7 881 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 GJB7Q6PEY0 223 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 TPRG1Q6ZUI0 275 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 RRAGAQ7L523 313 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 BHLHA9Q7RTU4 235 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 SCD5Q86SK9 330 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 CELF5Q8N6W0 485 aaKnown RBP8.9□□□□□ -0.98
SPARC-208ENST00000538026 DTWD2Q8NBA8 298 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 PJA1Q8NG27 643 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 BPIFB1Q8TDL5 484 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 MRPS31Q92665 395 aaKnown RBP8.9□□□□□ -0.98
SPARC-208ENST00000538026 DNASE1L2Q92874 299 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 CLDN23Q96B33 292 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 P2RY11Q96G91 374 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 SMARCD1Q96GM5 515 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 TMEM176AQ96HP8 235 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 CNOT6LQ96LI5 555 aaKnown RBP8.9□□□□□ -0.98
SPARC-208ENST00000538026 MED10Q9BTT4 135 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 DUSP16Q9BY84 665 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 FBRSL1Q9HCM7 1045 aaKnown RBP8.9□□□□□ -0.98
SPARC-208ENST00000538026 TRPC7Q9HCX4 862 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 LTB4R2Q9NPC1 389 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 DMAP1Q9NPF5 467 aaPredicted RBP8.9□□□□□ -0.98
SPARC-208ENST00000538026 GKN1Q9NS71 199 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 SAMSN1Q9NSI8 373 aaKnown RBP8.9□□□□□ -0.98
SPARC-208ENST00000538026 TDP1Q9NUW8 608 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 C2orf42Q9NWW7 574 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 GMIPQ9P107 970 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 USP3Q9Y6I4 520 aa8.9□□□□□ -0.98
SPARC-208ENST00000538026 FAM170BA6NMN3 283 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 H0Y858 1186 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 SCAMP3O14828 347 aaKnown RBP8.89□□□□□ -0.99
SPARC-208ENST00000538026 P4HA2O15460 535 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 CYP26A1O43174 497 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 COCHO43405 550 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 GNA14O95837 355 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 AFPP02771 609 aaKnown RBP8.89□□□□□ -0.99
SPARC-208ENST00000538026 HDCP19113 662 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 SLC9A1P19634 815 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 YWHAQP27348 245 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 KIF11P52732 1056 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 SLC7A9P82251 487 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 PFKPQ01813 784 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 NHLH1Q02575 133 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 IFRD2Q12894 506 aaPredicted RBP8.89□□□□□ -0.99
SPARC-208ENST00000538026 USP4Q13107 963 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 EML3Q32P44 896 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 HSP90AA4PQ58FG1 418 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 MIIPQ5JXC2 388 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 SH3RF2Q8TEC5 729 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 NDRG1Q92597 394 aaKnown RBP8.89□□□□□ -0.99
SPARC-208ENST00000538026 EZH1Q92800 747 aaPredicted RBP8.89□□□□□ -0.99
SPARC-208ENST00000538026 IRF7Q92985 503 aa8.89□□□□□ -0.99
SPARC-208ENST00000538026 E2F7Q96AV8 911 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms