RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 JADE1Q6IE81 842 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 TLDC1Q6P9B6 456 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 CCDC62Q6P9F0 684 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 PLCD3Q8N3E9 789 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 STAMBPL1Q96FJ0 436 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 IFT122Q9HBG6 1241 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 KIAA1257Q9ULG3 409 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 PTPRFP10586 1907 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 A0A0G2JMZ2 1700 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 M0QYV0 167 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 SPAG6O75602 509 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 WFS1O76024 890 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 MCF2P10911 925 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 FGFR1P11362 822 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 ADRA1DP25100 572 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 ELF1P32519 619 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 CLCN3P51790 818 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 ROR1Q01973 937 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 NOMO1Q15155 1222 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 FAM102AQ5T9C2 384 aaPredicted RBP16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 DARS2Q6PI48 645 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 GADL1Q6ZQY3 521 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 CXorf56Q9H5V9 222 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 HMGXB4Q9UGU5 601 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 CSADQ9Y600 493 aa16.75■□□□□ 0.27
CHMP1A-202ENST00000535997 POLR2AP24928 1970 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-202ENST00000535997 IQANK1A0A1B0GTG1 560 aa16.74■□□□□ 0.27
CHMP1A-202ENST00000535997 PGK2P07205 417 aa16.74■□□□□ 0.27
CHMP1A-202ENST00000535997 CDH6P55285 790 aa16.74■□□□□ 0.27
CHMP1A-202ENST00000535997 ACCSLQ4AC99 568 aa16.74■□□□□ 0.27
CHMP1A-202ENST00000535997 MAP7D3Q8IWC1 876 aa16.74■□□□□ 0.27
CHMP1A-202ENST00000535997 TTC39CQ8N584 583 aa16.74■□□□□ 0.27
CHMP1A-202ENST00000535997 GPATCH11Q8N954 259 aa16.74■□□□□ 0.27
CHMP1A-202ENST00000535997 CNKSR2Q8WXI2 1034 aa16.74■□□□□ 0.27
CHMP1A-202ENST00000535997 FGD4Q96M96 766 aa16.74■□□□□ 0.27
CHMP1A-202ENST00000535997 BARX2Q9UMQ3 279 aaPredicted RBP16.74■□□□□ 0.27
CHMP1A-202ENST00000535997 IKBKGQ9Y6K9 419 aa16.74■□□□□ 0.27
CHMP1A-202ENST00000535997 C2CD4BA6NLJ0 364 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 A8MUI8 341 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 TRAFD1O14545 582 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 MT-ND3P03897 115 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 T-ENOLP0DO92 83 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 TROVE2P10155 538 aaKnown RBP eCLIP16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 GPD1P21695 349 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 ELK3P41970 407 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 PHKA2P46019 1235 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 KYAT1Q16773 422 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 TAB3Q8N5C8 712 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 UTP4Q969X6 686 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 HPDLQ96IR7 371 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 FRMD8Q9BZ67 464 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 MANSC1Q9H8J5 431 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 HAO1Q9UJM8 370 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 C15orf41Q9Y2V0 281 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 TEX264Q9Y6I9 313 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 EVPLQ92817 2033 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 IRF6O14896 467 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 CHADO15335 359 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 CNMDO75829 334 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 PIAS1O75925 651 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 PDGFRAP16234 1089 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 IBSPP21815 317 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 TARSP26639 723 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 ZNF200P98182 395 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 KCNJ11Q14654 390 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 POTEAQ6S8J7 498 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 ZC3H18Q86VM9 953 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 RSRC1Q96IZ7 334 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 PEBP4Q96S96 227 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 ASCC2Q9H1I8 757 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 R3HDMLQ9H3Y0 253 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 SAR1AQ9NR31 198 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 ERAP1Q9NZ08 941 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 CHMP2BQ9UQN3 213 aa16.73■□□□□ 0.27
CHMP1A-202ENST00000535997 DNAJC25-GNG10A0A024R161 153 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 A0A0G2JLL6 359 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 TCRBV9S1A1TA0A576 114 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 PRPSAP2O60256 369 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 TXNP10599 105 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 INCA1Q0VD86 236 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 MMRN1Q13201 1228 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 PDK2Q15119 407 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 SLC10A6Q3KNW5 377 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 BOLA3Q53S33 107 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 LCLAT1Q6UWP7 414 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 PRRT2Q7Z6L0 340 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 CCDC125Q86Z20 511 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 IFNLR1Q8IU57 520 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 IGDCC3Q8IVU1 814 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 GPC2Q8N158 579 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 UBA3Q8TBC4 463 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 NSMCE1Q8WV22 266 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 SLC44A1Q8WWI5 657 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 RXFP2Q8WXD0 754 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 N4BP2L2Q92802 583 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 RNF157Q96PX1 679 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 RNPEPQ9H4A4 650 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 RGS17Q9UGC6 210 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 HNRNPCL1O60812 293 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms