RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 CIB2O75838 187 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 DLATP10515 647 aaKnown RBP20.01■□□□□ 0.79
SMPD1-210ENST00000534405 FGFR1P11362 822 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 PCSK6P29122 969 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 KRT76Q01546 638 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 PPIDQ08752 370 aaKnown RBP20.01■□□□□ 0.79
SMPD1-210ENST00000534405 ARHGEF16Q5VV41 709 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 BORAQ6PGQ7 559 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 EIF2AQ9BY44 585 aaKnown RBP20.01■□□□□ 0.79
SMPD1-210ENST00000534405 PLK2Q9NYY3 685 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 TCEAL9Q9UHQ7 104 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 TRMUO75648 421 aaKnown RBP20■□□□□ 0.79
SMPD1-210ENST00000534405 CLPTM1O96005 669 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 SFNP31947 248 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 PLCB3Q01970 1234 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 CYP24A1Q07973 514 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 AAGABQ6PD74 315 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 TRIM50Q86XT4 487 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 ZFRQ96KR1 1074 aaKnown RBP20■□□□□ 0.79
SMPD1-210ENST00000534405 CYTH2Q99418 400 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 RPAP3Q9H6T3 665 aaPredicted RBP20■□□□□ 0.79
SMPD1-210ENST00000534405 MYOZ2Q9NPC6 264 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 ARHGEF4Q9NR80 690 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 MAP3K20Q9NYL2 800 aaKnown RBP20■□□□□ 0.79
SMPD1-210ENST00000534405 DCTN4Q9UJW0 460 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 MTUS1Q9ULD2 1270 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 HBS1LQ9Y450 684 aaKnown RBP20■□□□□ 0.79
SMPD1-210ENST00000534405 WDR81Q562E7 1941 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 C15orf38-AP3S2A0A0A6YYH1 394 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 CCDC160A6NGH7 325 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 LSM1O15116 133 aaKnown RBP20■□□□□ 0.79
SMPD1-210ENST00000534405 STBD1O95210 358 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 COL6A2P12110 1019 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 DPEP1P16444 411 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 RAB15P59190 212 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 DLG1Q12959 904 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 ITGA7Q13683 1181 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 BAATQ14032 418 aaPredicted RBP20■□□□□ 0.79
SMPD1-210ENST00000534405 SLC1A5Q15758 541 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 ARPINQ7Z6K5 226 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 TMPRSS6Q8IU80 811 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 NIM1KQ8IY84 436 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 RIN3Q8TB24 985 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 MORC4Q8TE76 937 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 PSPC1Q8WXF1 523 aaKnown RBP20■□□□□ 0.79
SMPD1-210ENST00000534405 POMGNT1Q8WZA1 660 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 ATG4CQ96DT6 458 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 VPS50Q96JG6 964 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 CEP170P1Q96L14 293 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 C17orf75Q9HAS0 396 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 GABBR1Q9UBS5 961 aa20■□□□□ 0.79
SMPD1-210ENST00000534405 FAM32AQ9Y421 112 aaKnown RBP20■□□□□ 0.79
SMPD1-210ENST00000534405 SLC5A2P31639 672 aa19.99■□□□□ 0.79
SMPD1-210ENST00000534405 RPA3P35244 121 aaPredicted RBP19.99■□□□□ 0.79
SMPD1-210ENST00000534405 CDK16Q00536 496 aa19.99■□□□□ 0.79
SMPD1-210ENST00000534405 MMEL1Q495T6 779 aa19.99■□□□□ 0.79
SMPD1-210ENST00000534405 ACAD10Q6JQN1 1059 aa19.99■□□□□ 0.79
SMPD1-210ENST00000534405 DHDDSQ86SQ9 333 aa19.99■□□□□ 0.79
SMPD1-210ENST00000534405 TMC2Q8TDI7 906 aa19.99■□□□□ 0.79
SMPD1-210ENST00000534405 PRPF31Q8WWY3 499 aaKnown RBP19.99■□□□□ 0.79
SMPD1-210ENST00000534405 PRR11Q96HE9 360 aaPredicted RBP19.99■□□□□ 0.79
SMPD1-210ENST00000534405 NTPCRQ9BSD7 190 aaKnown RBP19.99■□□□□ 0.79
SMPD1-210ENST00000534405 TRABDQ9H4I3 376 aa19.99■□□□□ 0.79
SMPD1-210ENST00000534405 UBAP1Q9NZ09 502 aa19.99■□□□□ 0.79
SMPD1-210ENST00000534405 CLDN3O15551 220 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 ADCY3O60266 1144 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 TM7SF2O76062 418 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 GSTT2P0CG29 244 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 GSTT2BP0CG30 244 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 CLCN2P51788 898 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 PFKPQ01813 784 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 CAV1Q03135 178 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 MYLK3Q32MK0 819 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 SLC2A7Q6PXP3 512 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 TAS1R3Q7RTX0 852 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 KLHL4Q9C0H6 718 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 SENP6Q9GZR1 1112 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-210ENST00000534405 SENP1Q9P0U3 644 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 UVRAGQ9P2Y5 699 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 PCDHA10Q9Y5I2 948 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 AQP4P55087 323 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 COG7P83436 770 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 SYCP2LQ5T4T6 812 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 LMBRD2Q68DH5 695 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-210ENST00000534405 LLGL2Q6P1M3 1020 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 PACS1Q6VY07 963 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 ZNF516Q92618 1163 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 ITPKCQ96DU7 683 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 SNF8Q96H20 258 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 LRRC19Q9H756 370 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 XPNPEP1Q9NQW7 623 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 PLA2G4CQ9UP65 541 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 MTO1Q9Y2Z2 717 aaKnown RBP19.98■□□□□ 0.79
SMPD1-210ENST00000534405 DOCK5Q9H7D0 1870 aa19.98■□□□□ 0.79
SMPD1-210ENST00000534405 VWA5AO00534 786 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 FBP2O00757 339 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 RGS20O76081 388 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 PDGFRBP09619 1106 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 KRT5P13647 590 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 CLEC16AQ2KHT3 1053 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms