RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 USP4Q13107 963 aa24.73■■□□□ 1.55
YIF1A-213ENST00000534374 TMEM196Q5HYL7 178 aa24.73■■□□□ 1.55
YIF1A-213ENST00000534374 ZNF658Q5TYW1 1059 aaPredicted RBP24.73■■□□□ 1.55
YIF1A-213ENST00000534374 ACOT1Q86TX2 421 aa24.73■■□□□ 1.55
YIF1A-213ENST00000534374 ELOA2Q8IYF1 753 aaPredicted RBP24.73■■□□□ 1.55
YIF1A-213ENST00000534374 SH3RF2Q8TEC5 729 aa24.73■■□□□ 1.55
YIF1A-213ENST00000534374 OVCA2Q8WZ82 227 aa24.73■■□□□ 1.55
YIF1A-213ENST00000534374 EXOC4Q96A65 974 aa24.73■■□□□ 1.55
YIF1A-213ENST00000534374 SMARCD1Q96GM5 515 aa24.73■■□□□ 1.55
YIF1A-213ENST00000534374 KCNK16Q96T55 309 aa24.73■■□□□ 1.55
YIF1A-213ENST00000534374 MED10Q9BTT4 135 aa24.73■■□□□ 1.55
YIF1A-213ENST00000534374 TMEM8AQ9HCN3 771 aa24.73■■□□□ 1.55
YIF1A-213ENST00000534374 RBM12Q9NTZ6 932 aaKnown RBP24.73■■□□□ 1.55
YIF1A-213ENST00000534374 IL37Q9NZH6 218 aa24.73■■□□□ 1.55
YIF1A-213ENST00000534374 HOOK1Q9UJC3 728 aaKnown RBP24.73■■□□□ 1.55
YIF1A-213ENST00000534374 CETN3O15182 167 aa24.72■■□□□ 1.55
YIF1A-213ENST00000534374 ARSAP15289 507 aa24.72■■□□□ 1.55
YIF1A-213ENST00000534374 TRIM21P19474 475 aaKnown RBP24.72■■□□□ 1.55
YIF1A-213ENST00000534374 PRCPP42785 496 aa24.72■■□□□ 1.55
YIF1A-213ENST00000534374 NDST1P52848 882 aa24.72■■□□□ 1.55
YIF1A-213ENST00000534374 GRSF1Q12849 480 aaKnown RBP eCLIP24.72■■□□□ 1.55
YIF1A-213ENST00000534374 SPOPLQ6IQ16 392 aa24.72■■□□□ 1.55
YIF1A-213ENST00000534374 FAM35AQ86V20 835 aa24.72■■□□□ 1.55
YIF1A-213ENST00000534374 SMYD4Q8IYR2 804 aaPredicted RBP24.72■■□□□ 1.55
YIF1A-213ENST00000534374 FUKQ8N0W3 1084 aa24.72■■□□□ 1.55
YIF1A-213ENST00000534374 PDZD8Q8NEN9 1154 aa24.72■■□□□ 1.55
YIF1A-213ENST00000534374 TAS1R2Q8TE23 839 aa24.72■■□□□ 1.55
YIF1A-213ENST00000534374 FAXDC2Q96IV6 333 aa24.72■■□□□ 1.55
YIF1A-213ENST00000534374 ECT2Q9H8V3 914 aa24.72■■□□□ 1.55
YIF1A-213ENST00000534374 DMAP1Q9NPF5 467 aaPredicted RBP24.72■■□□□ 1.55
YIF1A-213ENST00000534374 TNFRSF10BO14763 440 aa24.71■■□□□ 1.55
YIF1A-213ENST00000534374 OLFM2O95897 454 aa24.71■■□□□ 1.55
YIF1A-213ENST00000534374 TRIM49P0CI25 452 aa24.71■■□□□ 1.55
YIF1A-213ENST00000534374 TRIM49CP0CI26 452 aa24.71■■□□□ 1.55
YIF1A-213ENST00000534374 IFNAR2P48551 515 aa24.71■■□□□ 1.55
YIF1A-213ENST00000534374 INCA1Q0VD86 236 aa24.71■■□□□ 1.55
YIF1A-213ENST00000534374 KRT39Q6A163 491 aa24.71■■□□□ 1.55
YIF1A-213ENST00000534374 CPA6Q8N4T0 437 aa24.71■■□□□ 1.55
YIF1A-213ENST00000534374 CCDC150Q8NCX0 1101 aa24.71■■□□□ 1.55
YIF1A-213ENST00000534374 ATP2A3Q93084 1043 aa24.71■■□□□ 1.55
YIF1A-213ENST00000534374 CHFRQ96EP1 664 aa24.71■■□□□ 1.55
YIF1A-213ENST00000534374 RNF38Q9H0F5 515 aa24.71■■□□□ 1.55
YIF1A-213ENST00000534374 PCDHA5Q9Y5H7 936 aa24.71■■□□□ 1.55
YIF1A-213ENST00000534374 OAS1P00973 400 aaKnown RBP24.7■■□□□ 1.54
YIF1A-213ENST00000534374 GJA4P35212 333 aa24.7■■□□□ 1.54
YIF1A-213ENST00000534374 ZXDBP98169 803 aa24.7■■□□□ 1.54
YIF1A-213ENST00000534374 SATB1Q01826 763 aa24.7■■□□□ 1.54
YIF1A-213ENST00000534374 NR1H3Q13133 447 aa24.7■■□□□ 1.54
YIF1A-213ENST00000534374 EML3Q32P44 896 aa24.7■■□□□ 1.54
YIF1A-213ENST00000534374 SNX30Q5VWJ9 437 aa24.7■■□□□ 1.54
YIF1A-213ENST00000534374 RUBCNQ92622 972 aa24.7■■□□□ 1.54
YIF1A-213ENST00000534374 SMARCE1Q969G3 411 aa24.7■■□□□ 1.54
YIF1A-213ENST00000534374 APOBEC3GQ9HC16 384 aaKnown RBP24.7■■□□□ 1.54
YIF1A-213ENST00000534374 CSNK1G1Q9HCP0 422 aa24.7■■□□□ 1.54
YIF1A-213ENST00000534374 FAM92AA1XBS5 289 aa24.69■■□□□ 1.54
YIF1A-213ENST00000534374 STX10O60499 249 aa24.69■■□□□ 1.54
YIF1A-213ENST00000534374 AP1G2O75843 785 aa24.69■■□□□ 1.54
YIF1A-213ENST00000534374 ABL1P00519 1130 aa24.69■■□□□ 1.54
YIF1A-213ENST00000534374 EPB41P11171 864 aaKnown RBP24.69■■□□□ 1.54
YIF1A-213ENST00000534374 DRD1P21728 446 aa24.69■■□□□ 1.54
YIF1A-213ENST00000534374 HOXA6P31267 233 aa24.69■■□□□ 1.54
YIF1A-213ENST00000534374 GALK1P51570 392 aa24.69■■□□□ 1.54
YIF1A-213ENST00000534374 Q6ZS52 159 aa24.69■■□□□ 1.54
YIF1A-213ENST00000534374 FBXO32Q969P5 355 aa24.69■■□□□ 1.54
YIF1A-213ENST00000534374 TSG101Q99816 390 aa24.69■■□□□ 1.54
YIF1A-213ENST00000534374 NT5C1AQ9BXI3 368 aa24.69■■□□□ 1.54
YIF1A-213ENST00000534374 DNAI2Q9GZS0 605 aa24.69■■□□□ 1.54
YIF1A-213ENST00000534374 EPC1Q9H2F5 836 aa24.69■■□□□ 1.54
YIF1A-213ENST00000534374 LINC00597Q9H2U6 94 aa24.69■■□□□ 1.54
YIF1A-213ENST00000534374 WNT6Q9Y6F9 365 aa24.69■■□□□ 1.54
YIF1A-213ENST00000534374 ATG2BQ96BY7 2078 aa24.68■■□□□ 1.54
YIF1A-213ENST00000534374 MYH10P35580 1976 aa24.68■■□□□ 1.54
YIF1A-213ENST00000534374 LEFTY2O00292 366 aa24.68■■□□□ 1.54
YIF1A-213ENST00000534374 FKBP3Q00688 224 aaKnown RBP24.68■■□□□ 1.54
YIF1A-213ENST00000534374 FSTL4Q6MZW2 842 aa24.68■■□□□ 1.54
YIF1A-213ENST00000534374 C12orf29Q8N999 325 aa24.68■■□□□ 1.54
YIF1A-213ENST00000534374 SCAMP5Q8TAC9 235 aa24.68■■□□□ 1.54
YIF1A-213ENST00000534374 SLC2A14Q8TDB8 520 aa24.68■■□□□ 1.54
YIF1A-213ENST00000534374 HNRNPABQ99729 332 aaKnown RBP24.68■■□□□ 1.54
YIF1A-213ENST00000534374 SMOQ99835 787 aa24.68■■□□□ 1.54
YIF1A-213ENST00000534374 P2RY13Q9BPV8 354 aa24.68■■□□□ 1.54
YIF1A-213ENST00000534374 NIF3L1Q9GZT8 377 aa24.68■■□□□ 1.54
YIF1A-213ENST00000534374 HMGXB4Q9UGU5 601 aa24.68■■□□□ 1.54
YIF1A-213ENST00000534374 CHORDC1Q9UHD1 332 aaPredicted RBP24.68■■□□□ 1.54
YIF1A-213ENST00000534374 ATG13O75143 517 aa24.67■■□□□ 1.54
YIF1A-213ENST00000534374 TUBP50607 506 aa24.67■■□□□ 1.54
YIF1A-213ENST00000534374 SLC5A3P53794 718 aa24.67■■□□□ 1.54
YIF1A-213ENST00000534374 FBXO43Q4G163 708 aa24.67■■□□□ 1.54
YIF1A-213ENST00000534374 ERMP1Q7Z2K6 904 aa24.67■■□□□ 1.54
YIF1A-213ENST00000534374 ZC3H3Q8IXZ2 948 aaKnown RBP24.67■■□□□ 1.54
YIF1A-213ENST00000534374 TTC39CQ8N584 583 aa24.67■■□□□ 1.54
YIF1A-213ENST00000534374 TTC16Q8NEE8 873 aa24.67■■□□□ 1.54
YIF1A-213ENST00000534374 ZMIZ2Q8NF64 920 aa24.67■■□□□ 1.54
YIF1A-213ENST00000534374 EEF2KMTQ96G04 330 aa24.67■■□□□ 1.54
YIF1A-213ENST00000534374 FBXO44Q9H4M3 255 aa24.67■■□□□ 1.54
YIF1A-213ENST00000534374 FAM124BQ9H5Z6 455 aaPredicted RBP24.67■■□□□ 1.54
YIF1A-213ENST00000534374 MMRN2Q9H8L6 949 aa24.67■■□□□ 1.54
YIF1A-213ENST00000534374 KRT82Q9NSB4 513 aa24.67■■□□□ 1.54
YIF1A-213ENST00000534374 FRYLO94915 3013 aa24.67■■□□□ 1.54
YIF1A-213ENST00000534374 K7ESF4 209 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms