RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 TTLL2Q9BWV7 592 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 GPR88Q9GZN0 384 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 CHRDQ9H2X0 955 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 NMUR1Q9HB89 426 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 TRPV5Q9NQA5 729 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 KRT82Q9NSB4 513 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 CHURC1-FNTBB4DL54 471 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 K7ESF4 209 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 LEFTY2O00292 366 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 COCHO43405 550 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 AP1G2O75843 785 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 GABBR2O75899 941 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 MYL1P05976 194 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 CHRM1P11229 460 aaPredicted RBP10.23□□□□□ -0.77
SSBP3-215ENST00000533946 GJA4P35212 333 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 PSMC2P35998 433 aaKnown RBP10.23□□□□□ -0.77
SSBP3-215ENST00000533946 AVPR1AP37288 418 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 FNTBP49356 437 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 NUBP1P53384 320 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 SLC5A3P53794 718 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 NOP14P78316 857 aaKnown RBP10.23□□□□□ -0.77
SSBP3-215ENST00000533946 NUCB2P80303 420 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 APBA1Q02410 837 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 LRMPQ12912 555 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 USP4Q13107 963 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 CAMK4Q16566 473 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 SGSM1Q2NKQ1 1148 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 ITPRIPL2Q3MIP1 535 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 ARHGAP29Q52LW3 1261 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 PPP1R26Q5T8A7 1209 aaPredicted RBP10.23□□□□□ -0.77
SSBP3-215ENST00000533946 ZNF658Q5TYW1 1059 aaPredicted RBP10.23□□□□□ -0.77
SSBP3-215ENST00000533946 HEATR6Q6AI08 1181 aaKnown RBP10.23□□□□□ -0.77
SSBP3-215ENST00000533946 KLHL10Q6JEL2 608 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 VSTM1Q6UX27 236 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 C4orf50Q6ZRC1 276 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 CRYBG2Q8N1P7 616 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 SPATA18Q8TC71 538 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 NELL1Q92832 810 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 NKD2Q969F2 451 aaPredicted RBP10.23□□□□□ -0.77
SSBP3-215ENST00000533946 ERLEC1Q96DZ1 483 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 ZSWIM1Q9BR11 485 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 OSBPL6Q9BZF3 934 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 PRMT8Q9NR22 394 aaPredicted RBP10.23□□□□□ -0.77
SSBP3-215ENST00000533946 FRMD4BQ9Y2L6 1034 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 R3HCC1Q9Y3T6 440 aaKnown RBP10.23□□□□□ -0.77
SSBP3-215ENST00000533946 ATP6V1DQ9Y5K8 247 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 CPQQ9Y646 472 aa10.23□□□□□ -0.77
SSBP3-215ENST00000533946 TRAV19A0A0A6YYK7 116 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 RNF225M0QZC1 329 aaPredicted RBP10.22□□□□□ -0.77
SSBP3-215ENST00000533946 IKBKBO14920 756 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 CYP26A1O43174 497 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 LAMTOR5O43504 91 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 HRO43593 1189 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 OAS1P00973 400 aaKnown RBP10.22□□□□□ -0.77
SSBP3-215ENST00000533946 HNRNPLP14866 589 aaKnown RBP eCLIP10.22□□□□□ -0.773e-24■■■■■ 36.5
SSBP3-215ENST00000533946 OPRD1P41143 372 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 RPS9P46781 194 aaKnown RBP10.22□□□□□ -0.77
SSBP3-215ENST00000533946 RAD23BP54727 409 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 INCA1Q0VD86 236 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 EMC10Q5UCC4 262 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 TTI2Q6NXR4 508 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 CLEC20AQ6ZU45 233 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 FILIP1Q7Z7B0 1213 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 SCD5Q86SK9 330 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 NUP93Q8N1F7 819 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 SLC4A11Q8NBS3 891 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 SMARCE1Q969G3 411 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 GCNAQ96QF7 691 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 ECT2Q9H8V3 914 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 DUS2Q9NX74 493 aaKnown RBP10.22□□□□□ -0.77
SSBP3-215ENST00000533946 OBP2AQ9NY56 170 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 IL37Q9NZH6 218 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 CFAP97Q9P2B7 532 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 HCN2Q9UL51 889 aa10.22□□□□□ -0.77
SSBP3-215ENST00000533946 MYO18AQ92614 2054 aaKnown RBP10.21□□□□□ -0.77
SSBP3-215ENST00000533946 MAPK13O15264 365 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 GREM1O60565 184 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 CILPO75339 1184 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 FGF19O95750 216 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 OLFM2O95897 454 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 USP17L7P0C7H9 530 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 ZDHHC11BP0C7U3 371 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 IRF1P10914 325 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 ANXA13P27216 316 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 YWHAQP27348 245 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 MORC3Q14149 939 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 ZNF268Q14587 947 aaPredicted RBP10.21□□□□□ -0.77
SSBP3-215ENST00000533946 EDRF1Q3B7T1 1238 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 DCAF17Q5H9S7 520 aaPredicted RBP10.21□□□□□ -0.77
SSBP3-215ENST00000533946 TMEM196Q5HYL7 178 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 RHBDF2Q6PJF5 856 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 INTS8Q75QN2 995 aaKnown RBP10.21□□□□□ -0.77
SSBP3-215ENST00000533946 TTC30AQ86WT1 665 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 ARHGEF19Q8IW93 802 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 UBR7Q8N806 425 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 ZBTB44Q8NCP5 570 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 LMO3Q8TAP4 145 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 OSCP1Q8WVF1 389 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 TFAP2BQ92481 460 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 FBXO32Q969P5 355 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms