RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 SLC5A3P53794 718 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 SLC8A3P57103 927 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 MCCD1P59942 119 aaPredicted RBP12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 PFKPQ01813 784 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 TAF10Q12962 218 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 KCNJ12Q14500 433 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 GOLGA7BQ2TAP0 167 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 CC2D1AQ6P1N0 951 aaPredicted RBP12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 VITQ6UXI7 678 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 PAQR9Q6ZVX9 377 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 TMEM150AQ86TG1 271 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 MON1AQ86VX9 555 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 ARHGEF19Q8IW93 802 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 FBXL6Q8N531 539 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 EHBP1Q8NDI1 1231 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 SCAMP5Q8TAC9 235 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 WHAMMQ8TF30 809 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 DEPDC1BQ8WUY9 529 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 ASIC4Q96FT7 647 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 MYRFLQ96LU7 910 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 MED15Q96RN5 788 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 HNRNPABQ99729 332 aaKnown RBP12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 SMOQ99835 787 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 SLC46A2Q9BY10 475 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 NACA2Q9H009 215 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 ZMYM5Q9UJ78 669 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 NFE2L3Q9Y4A8 694 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 MUC3AQ02505 3323 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 PATJQ8NI35 1801 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 C2orf78A6NCI8 922 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 TADA3O75528 432 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 USP17L7P0C7H9 530 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 USP8P40818 1118 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 RAD23BP54727 409 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 MAN2A1Q16706 1144 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 SGO2Q562F6 1265 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 PPP1R26Q5T8A7 1209 aaPredicted RBP12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 GBP6Q6ZN66 633 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 C11orf57Q6ZUT1 292 aaPredicted RBP12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 CELF5Q8N6W0 485 aaKnown RBP12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 ARL14EPQ8N8R7 260 aaPredicted RBP12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 SLC4A11Q8NBS3 891 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 CSGALNACT1Q8TDX6 532 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 KAT5Q92993 513 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 RSPRY1Q96DX4 576 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 FAXDC2Q96IV6 333 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 CEP295NLQ96MC4 621 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 TUBGCP2Q9BSJ2 902 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 TBC1D17Q9HA65 648 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 UBE2TQ9NPD8 197 aaPredicted RBP12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 SLC2A4RGQ9NR83 387 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 SAMSN1Q9NSI8 373 aaKnown RBP12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 THG1LQ9NWX6 298 aaKnown RBP12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 TMEM63CQ9P1W3 806 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 WNT16Q9UBV4 365 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 HESX1Q9UBX0 185 aa12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 HELZP42694 1942 aaKnown RBP12.13□□□□□ -0.47
UBASH3B-208ENST00000533451 MIA3Q5JRA6 1907 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 PMM2O15305 246 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 BEST1O76090 585 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 MBL2P11226 248 aaPredicted RBP12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 NPR3P17342 541 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 HDCP19113 662 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 COL9A1P20849 921 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 ACO1P21399 889 aaKnown RBP12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 PDE6CP51160 858 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 KPNA1P52294 538 aaPredicted RBP12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 MLF2Q15773 248 aaPredicted RBP12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 ARHGAP44Q17R89 818 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 EXOC3L4Q17RC7 722 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 CT47A1Q5JQC4 288 aaPredicted RBP12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 TRIM65Q6PJ69 517 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 RBM43Q6ZSC3 357 aaKnown RBP12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 CLEC20AQ6ZU45 233 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 TPRG1Q6ZUI0 275 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 IRF2BP1Q8IU81 584 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 MFSD6LQ8IWD5 586 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 RBBP8NLQ8NC74 664 aaPredicted RBP12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 PDZD8Q8NEN9 1154 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 ANKRD20A12PQ8NF67 263 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 TTC8Q8TAM2 541 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 BPIFB1Q8TDL5 484 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 IRF7Q92985 503 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 SHDQ96IW2 340 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 ZFYVE19Q96K21 471 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 CYP2S1Q96SQ9 504 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 NAT10Q9H0A0 1025 aaKnown RBP12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 FBXO44Q9H4M3 255 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 TRPV4Q9HBA0 871 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 HEBP1Q9NRV9 189 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 TDP1Q9NUW8 608 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 SMPD4Q9NXE4 827 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 TAB2Q9NYJ8 693 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 GMIPQ9P107 970 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 CCL26Q9Y258 94 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 TRIOO75962 3097 aa12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 KIF26AQ9ULI4 1882 aaPredicted RBP12.12□□□□□ -0.47
UBASH3B-208ENST00000533451 KRBA1A5PL33 1030 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 ZNF840PA6NDX5 716 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 CYP26A1O43174 497 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms