RNA–Protein interactions for RNA: ENST00000533259.1

PDE4DIP-231, Transcript of phosphodiesterase 4D interacting protein, human

TSL 4

Gene PDE4DIP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-231	ENST00000533259	TCP11X2	Q5H9J9	407 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	TMEM196	Q5HYL7	178 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	SDHAF4	Q5VUM1	108 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	TRIM68	Q6AZZ1	485 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	PRR23C	Q6ZRP0	262 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	MON1A	Q86VX9	555 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	IRF2BP1	Q8IU81	584 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	FAM160A2	Q8N612	972 aa	Predicted RBP	11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	C1orf127	Q8N9H9	656 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	STKLD1	Q8NE28	680 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	TMC2	Q8TDI7	906 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	PARD3B	Q8TEW8	1205 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	ACBD6	Q9BR61	282 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	PI4K2A	Q9BTU6	479 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	RBSN	Q9H1K0	784 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	EBF3	Q9H4W6	596 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	TDP1	Q9NUW8	608 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	THG1L	Q9NWX6	298 aa	Known RBP	11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	SIX4	Q9UIU6	781 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	ZMYM5	Q9UJ78	669 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	L1RE1	Q9UN81	338 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	AGAP1	Q9UPQ3	857 aa		11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	GREB1	Q4ZG55	1949 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	GABRD	O14764	452 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	STX10	O60499	249 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	PHACTR2	O75167	634 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	TADA3	O75528	432 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	TNNC2	P02585	160 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	TMEM191B	P0C7N4	346 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	ARSA	P15289	507 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	CYP2F1	P24903	491 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	DDX6	P26196	483 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	EEF1G	P26641	437 aa	Known RBP	11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	POLR2B	P30876	1174 aa	Known RBP	11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	PNPLA4	P41247	253 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	PXN	P49023	591 aa	Predicted RBP	11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	BIRC3	Q13489	604 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	TAF12	Q16514	161 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	DDR2	Q16832	855 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	CCDC142	Q17RM4	750 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	DUOXA2	Q1HG44	320 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	NAIF1	Q69YI7	327 aa	Predicted RBP	11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	LIMS2	Q7Z4I7	341 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	OSTM1	Q86WC4	334 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	GAS2L3	Q86XJ1	694 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	PLEKHO2	Q8TD55	490 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	NETO1	Q8TDF5	533 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	ANKRD36BP1	Q96IX9	119 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	MYRFL	Q96LU7	910 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	ZNF560	Q96MR9	790 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	GCNA	Q96QF7	691 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	SLC22A12	Q96S37	553 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	CYP2S1	Q96SQ9	504 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	TUBGCP2	Q9BSJ2	902 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	VPS16	Q9H269	839 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	INTS13	Q9NVM9	706 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	GDAP2	Q9NXN4	497 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	TAB2	Q9NYJ8	693 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	GTF3C4	Q9UKN8	822 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	ABCA7	Q8IZY2	2146 aa		11.41	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	HCRT	O43612	131 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	NOL4	O94818	638 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	SERPINC1	P01008	464 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	EGF	P01133	1207 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	ITGB3	P05106	788 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	KRT19	P08727	400 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	CSH1	P0DML2	217 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	CSH2	P0DML3	217 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	ATP1A3	P13637	1013 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	ACAT1	P24752	427 aa	Known RBP	11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	AVPR1A	P37288	418 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	RAP1GAP	P47736	663 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	GCLM	P48507	274 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	GALK1	P51570	392 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	AP3M2	P53677	418 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	TSPY1	Q01534	308 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	ZNF268	Q14587	947 aa	Predicted RBP	11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	NFE2	Q16621	373 aa	Predicted RBP	11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	INTS6L	Q5JSJ4	861 aa	Known RBP	11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	CDKAL1	Q5VV42	579 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	FAM171B	Q6P995	826 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	WDR49	Q8IV35	697 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	TRIM59	Q8IWR1	403 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	TMEM86A	Q8N2M4	240 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	LRRC52	Q8N7C0	313 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	OR5B17	Q8NGF7	314 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	ZNF516	Q92618	1163 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	EZH1	Q92800	747 aa	Predicted RBP	11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	CGRRF1	Q99675	332 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	ABCB6	Q9NP58	842 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	DDX43	Q9NXZ2	648 aa	Known RBP	11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	CFAP47	Q6ZTR5	3102 aa		11.4	□□□□□ -0.58
PDE4DIP-231	ENST00000533259	GON4L	Q3T8J9	2241 aa		11.39	□□□□□ -0.59
PDE4DIP-231	ENST00000533259	CCDC163	A0A0D9SF12	145 aa		11.39	□□□□□ -0.59

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