RNA–Protein interactions for RNA: ENST00000531768.1

RSF1-210, Transcript of remodeling and spacing factor 1, human

TSL 2

Gene RSF1, Length 626 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RSF1-210	ENST00000531768	UNC5C	O95185	931 aa		4.29	□□□□□ -1.72
RSF1-210	ENST00000531768	VNN1	O95497	513 aa		4.29	□□□□□ -1.72
RSF1-210	ENST00000531768	MT-CO3	P00414	261 aa		4.29	□□□□□ -1.72
RSF1-210	ENST00000531768	MYBL2	P10244	700 aa		4.29	□□□□□ -1.72
RSF1-210	ENST00000531768	CTSA	P10619	480 aa		4.29	□□□□□ -1.72
RSF1-210	ENST00000531768	TYR	P14679	529 aa		4.29	□□□□□ -1.72
RSF1-210	ENST00000531768	ADORA2A	P29274	412 aa		4.29	□□□□□ -1.72
RSF1-210	ENST00000531768	MYO1E	Q12965	1108 aa		4.29	□□□□□ -1.72
RSF1-210	ENST00000531768	ABCB5	Q2M3G0	1257 aa		4.29	□□□□□ -1.72
RSF1-210	ENST00000531768	EMC10	Q5UCC4	262 aa		4.29	□□□□□ -1.72
RSF1-210	ENST00000531768	SIRT6	Q8N6T7	355 aa		4.29	□□□□□ -1.72
RSF1-210	ENST00000531768	IGFBPL1	Q8WX77	278 aa		4.29	□□□□□ -1.72
RSF1-210	ENST00000531768	PCDHA1	Q9Y5I3	950 aa		4.29	□□□□□ -1.72
RSF1-210	ENST00000531768	SLC28A2	O43868	658 aa		4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	HSD3B2	P26439	372 aa		4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	LRPAP1	P30533	357 aa		4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	KRTAP10-5	P60370	271 aa		4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	RPS13	P62277	151 aa	Known RBP	4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	FHL3	Q13643	280 aa		4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	LY6K	Q17RY6	165 aa		4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	NECAB2	Q7Z6G3	386 aa		4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	NOP9	Q86U38	636 aa	Known RBP	4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	IZUMO1	Q8IYV9	350 aa		4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	ABRA	Q8N0Z2	381 aa		4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	MPLKIP	Q8TAP9	179 aa		4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	RSPRY1	Q96DX4	576 aa		4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	ZPBP	Q9BS86	351 aa		4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	LMBRD1	Q9NUN5	540 aa		4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	PLEKHM1	Q9Y4G2	1056 aa		4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	SNX14	Q9Y5W7	946 aa		4.28	□□□□□ -1.72
RSF1-210	ENST00000531768	LACTBL1	A8MY62	500 aa		4.27	□□□□□ -1.73
RSF1-210	ENST00000531768	GRP	P07492	148 aa		4.27	□□□□□ -1.73
RSF1-210	ENST00000531768	PHKG2	P15735	406 aa		4.27	□□□□□ -1.73
RSF1-210	ENST00000531768	HDC	P19113	662 aa		4.27	□□□□□ -1.73
RSF1-210	ENST00000531768	TNFRSF1B	P20333	461 aa		4.27	□□□□□ -1.73
RSF1-210	ENST00000531768	LARS2	Q15031	903 aa	Known RBP	4.27	□□□□□ -1.73
RSF1-210	ENST00000531768	SYDE2	Q5VT97	1194 aa		4.27	□□□□□ -1.73
RSF1-210	ENST00000531768	MMP21	Q8N119	569 aa		4.27	□□□□□ -1.73
RSF1-210	ENST00000531768	FAM167A	Q96KS9	214 aa		4.27	□□□□□ -1.73
RSF1-210	ENST00000531768	TRMT13	Q9NUP7	481 aa	Known RBP	4.27	□□□□□ -1.73
RSF1-210	ENST00000531768	TTC3	P53804	2025 aa		4.27	□□□□□ -1.73
RSF1-210	ENST00000531768	FTL	P02792	175 aa	Predicted RBP	4.26	□□□□□ -1.73
RSF1-210	ENST00000531768	APEH	P13798	732 aa	Known RBP	4.26	□□□□□ -1.73
RSF1-210	ENST00000531768	SATB1	Q01826	763 aa		4.26	□□□□□ -1.73
RSF1-210	ENST00000531768	MTX1	Q13505	466 aa		4.26	□□□□□ -1.73
RSF1-210	ENST00000531768	ZIK1	Q3SY52	487 aa	Predicted RBP	4.26	□□□□□ -1.73
RSF1-210	ENST00000531768	EFCAB2	Q5VUJ9	269 aa		4.26	□□□□□ -1.73
RSF1-210	ENST00000531768	TMEM65	Q6PI78	240 aa		4.26	□□□□□ -1.73
RSF1-210	ENST00000531768	ZNF280B	Q86YH2	543 aa		4.26	□□□□□ -1.73
RSF1-210	ENST00000531768	B4GALNT2	Q8NHY0	566 aa		4.26	□□□□□ -1.73
RSF1-210	ENST00000531768	XPR1	Q9UBH6	696 aa		4.26	□□□□□ -1.73
RSF1-210	ENST00000531768	SHTN1	A0MZ66	631 aa		4.25	□□□□□ -1.73
RSF1-210	ENST00000531768	CES2	O00748	559 aa		4.25	□□□□□ -1.73
RSF1-210	ENST00000531768	GK	P32189	559 aa		4.25	□□□□□ -1.73
RSF1-210	ENST00000531768	MAP2K6	P52564	334 aa		4.25	□□□□□ -1.73
RSF1-210	ENST00000531768	COPB1	P53618	953 aa	Known RBP	4.25	□□□□□ -1.73
RSF1-210	ENST00000531768	SOX8	P57073	446 aa		4.25	□□□□□ -1.73
RSF1-210	ENST00000531768	ZXDB	P98169	803 aa		4.25	□□□□□ -1.73
RSF1-210	ENST00000531768	LMAN2	Q12907	356 aa		4.25	□□□□□ -1.73
RSF1-210	ENST00000531768	DGKK	Q5KSL6	1271 aa		4.25	□□□□□ -1.73
RSF1-210	ENST00000531768	KRTAP5-4	Q6L8H1	288 aa		4.25	□□□□□ -1.73
RSF1-210	ENST00000531768	LINC01465	Q8N7H1	131 aa		4.25	□□□□□ -1.73
RSF1-210	ENST00000531768	BRIX1	Q8TDN6	353 aa	Known RBP	4.25	□□□□□ -1.73
RSF1-210	ENST00000531768	PNPO	Q9NVS9	261 aa		4.25	□□□□□ -1.73
RSF1-210	ENST00000531768	MCM8	Q9UJA3	840 aa		4.25	□□□□□ -1.73
RSF1-210	ENST00000531768	TRHDE	Q9UKU6	1024 aa		4.25	□□□□□ -1.73
RSF1-210	ENST00000531768	FGF2	P09038	288 aa		4.24	□□□□□ -1.73
RSF1-210	ENST00000531768	KCNA3	P22001	575 aa		4.24	□□□□□ -1.73
RSF1-210	ENST00000531768	DGKE	P52429	567 aa		4.24	□□□□□ -1.73
RSF1-210	ENST00000531768	SUMO2	P61956	95 aa	Known RBP	4.24	□□□□□ -1.73
RSF1-210	ENST00000531768	ODF1	Q14990	250 aa		4.24	□□□□□ -1.73
RSF1-210	ENST00000531768	RANBP10	Q6VN20	620 aa		4.24	□□□□□ -1.73
RSF1-210	ENST00000531768	UBE2Q1	Q7Z7E8	422 aa		4.24	□□□□□ -1.73
RSF1-210	ENST00000531768	ZNF479	Q96JC4	524 aa		4.24	□□□□□ -1.73
RSF1-210	ENST00000531768	MESP1	Q9BRJ9	268 aa		4.24	□□□□□ -1.73
RSF1-210	ENST00000531768	MRPL44	Q9H9J2	332 aa	Known RBP	4.24	□□□□□ -1.73
RSF1-210	ENST00000531768	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.24	□□□□□ -1.73
RSF1-210	ENST00000531768	LPAR3	Q9UBY5	353 aa		4.24	□□□□□ -1.73
RSF1-210	ENST00000531768	IGLV5-39	A0A0G2JS06	123 aa		4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	PMPCB	O75439	489 aa		4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	CYP2C9	P11712	490 aa		4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	PDC	P20941	246 aa		4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	DIO1	P49895	249 aa		4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	MLC1	Q15049	377 aa		4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	SLC9C1	Q4G0N8	1177 aa		4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	TMEM63B	Q5T3F8	832 aa		4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	GSG1L	Q6UXU4	331 aa		4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	DCDC5	Q6ZRR9	648 aa		4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	PTCHD4	Q6ZW05	846 aa		4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	PNMA8A	Q86V59	439 aa	Predicted RBP	4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	MIER2	Q8N344	545 aa		4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	MAFA	Q8NHW3	353 aa	Predicted RBP	4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	C17orf80	Q9BSJ5	609 aa		4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	TMEM204	Q9BSN7	226 aa		4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	GAR1	Q9NY12	217 aa	Known RBP	4.23	□□□□□ -1.73
RSF1-210	ENST00000531768	TLDC2	A0PJX2	215 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms