RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 ATN1P54259 1190 aaPredicted RBP15.14■□□□□ 0.01
LRRK1-207ENST00000531270 GEMIN4P57678 1058 aaKnown RBP15.14■□□□□ 0.01
LRRK1-207ENST00000531270 CHRNB3Q05901 458 aa15.14■□□□□ 0.01
LRRK1-207ENST00000531270 ALKBH2Q6NS38 261 aa15.14■□□□□ 0.01
LRRK1-207ENST00000531270 MRPS31Q92665 395 aaKnown RBP15.14■□□□□ 0.01
LRRK1-207ENST00000531270 SGSM3Q96HU1 749 aa15.14■□□□□ 0.01
LRRK1-207ENST00000531270 VPS28Q9UK41 221 aa15.14■□□□□ 0.01
LRRK1-207ENST00000531270 STIP1P31948 543 aaKnown RBP15.14■□□□□ 0.01
LRRK1-207ENST00000531270 RFC5P40937 340 aa15.14■□□□□ 0.01
LRRK1-207ENST00000531270 YME1L1Q96TA2 773 aa15.14■□□□□ 0.01
LRRK1-207ENST00000531270 NUDT12Q9BQG2 462 aa15.14■□□□□ 0.01
LRRK1-207ENST00000531270 ILKAPQ9H0C8 392 aaPredicted RBP15.14■□□□□ 0.01
LRRK1-207ENST00000531270 GPRC5DQ9NZD1 345 aa15.14■□□□□ 0.01
LRRK1-207ENST00000531270 FAM205CA6NFA0 338 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 MAPK1P28482 360 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 NT5C2P49902 561 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 C12orf60Q5U649 245 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 FAM45BPQ6NSW5 357 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 ZNF544Q6NX49 715 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 GPRC5AQ8NFJ5 357 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 FEZF2Q8TBJ5 459 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 RIN2Q8WYP3 895 aaPredicted RBP15.13■□□□□ 0.01
LRRK1-207ENST00000531270 APOL2Q9BQE5 337 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 MIEF1Q9NQG6 463 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 FBXO10Q9UK96 956 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 VPS9D1Q9Y2B5 631 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 EDRF1Q3B7T1 1238 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 ATP6AP1LQ52LC2 224 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 SETD3Q86TU7 594 aaPredicted RBP15.13■□□□□ 0.01
LRRK1-207ENST00000531270 NT5DC3Q86UY8 548 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 UTP15Q8TED0 518 aaKnown RBP15.13■□□□□ 0.01
LRRK1-207ENST00000531270 CASP10Q92851 521 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 OLFM1Q99784 485 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 CLPBQ9H078 707 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 KLHL25Q9H0H3 589 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 WDR41Q9HAD4 459 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 ERAP1Q9NZ08 941 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 FOXP2O15409 715 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 EXTL3O43909 919 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 EFEMP1Q12805 493 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 CNGA2Q16280 664 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 ATG16L2Q8NAA4 619 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 ACOX2Q99424 681 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 VPS33BQ9H267 617 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 RPS6KL1Q9Y6S9 549 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 SFSWAPQ12872 951 aaKnown RBP15.13■□□□□ 0.01
LRRK1-207ENST00000531270 SLC30A9Q6PML9 568 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 LRIG3Q6UXM1 1119 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 NEDD1Q8NHV4 660 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 GPATCH2LQ9NWQ4 482 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 PTCH1Q13635 1447 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 MYL4P12829 197 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 TALDO1P37837 337 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 CLK2P49760 499 aaKnown RBP15.13■□□□□ 0.01
LRRK1-207ENST00000531270 DNAJC3Q13217 504 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 SP8Q8IXZ3 490 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 AHI1Q8N157 1196 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 MRPL48Q96GC5 212 aaKnown RBP15.13■□□□□ 0.01
LRRK1-207ENST00000531270 PHACTR1Q9C0D0 580 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 NIF3L1Q9GZT8 377 aa15.13■□□□□ 0.01
LRRK1-207ENST00000531270 TMEM191CA6NGB0 347 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 CHURC1-FNTBB4DL54 471 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 NDUFB10O96000 172 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 FGFR2P21802 821 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 H7C4K7 107 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 CKBP12277 381 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 RHOAP61586 193 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 ZSWIM7Q19AV6 140 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 ZNF618Q5T7W0 954 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 TRMT11Q7Z4G4 463 aaKnown RBP15.12■□□□□ 0.01
LRRK1-207ENST00000531270 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.12■□□□□ 0.01
LRRK1-207ENST00000531270 DDHD1Q8NEL9 900 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 MDM1Q8TC05 714 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 ZNF512BQ96KM6 892 aaPredicted RBP15.12■□□□□ 0.01
LRRK1-207ENST00000531270 GLT1D1Q96MS3 346 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 C10orf88Q9H8K7 445 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 ZNRF3Q9ULT6 936 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 PLA2G6O60733 806 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 STAG3L1P0CL83 205 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 TCF7P36402 384 aaPredicted RBP15.12■□□□□ 0.01
LRRK1-207ENST00000531270 HLA-DQA1Q5Y7H0 255 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 FAM84BQ96KN1 310 aaPredicted RBP15.12■□□□□ 0.01
LRRK1-207ENST00000531270 TRIM9Q9C026 710 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 OSBPL5Q9H0X9 879 aaPredicted RBP15.12■□□□□ 0.01
LRRK1-207ENST00000531270 SPAG6O75602 509 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 B3GAT3O94766 335 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 UMPSP11172 480 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 STX5Q13190 355 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 BARGINQ6ZT62 677 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 CDK20Q8IZL9 346 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 CLYBLQ8N0X4 340 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 RSPH1Q8WYR4 309 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 DTNBP1Q96EV8 351 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 FICDQ9BVA6 458 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 KIFC1Q9BW19 673 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 TARS2Q9BW92 718 aaKnown RBP15.12■□□□□ 0.01
LRRK1-207ENST00000531270 TMEM8AQ9HCN3 771 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 ARHGEF12Q9NZN5 1544 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 CBX4O00257 560 aa15.12■□□□□ 0.01
LRRK1-207ENST00000531270 KATNA1O75449 491 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms