RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 RALGAPA1Q6GYQ0 2036 aa16.79■□□□□ 0.28
CPSF1-205ENST00000531042 LEFTY2O00292 366 aa16.79■□□□□ 0.28
CPSF1-205ENST00000531042 PDXKO00764 312 aa16.79■□□□□ 0.28
CPSF1-205ENST00000531042 VNN1O95497 513 aa16.79■□□□□ 0.28
CPSF1-205ENST00000531042 NFATC1O95644 943 aa16.79■□□□□ 0.28
CPSF1-205ENST00000531042 OLFM2O95897 454 aa16.79■□□□□ 0.28
CPSF1-205ENST00000531042 TAF10Q12962 218 aa16.79■□□□□ 0.28
CPSF1-205ENST00000531042 NCOA4Q13772 614 aa16.79■□□□□ 0.28
CPSF1-205ENST00000531042 ZNF699Q32M78 642 aa16.79■□□□□ 0.28
CPSF1-205ENST00000531042 ZNF667Q5HYK9 610 aa16.79■□□□□ 0.28
CPSF1-205ENST00000531042 CAMKK1Q8N5S9 505 aa16.79■□□□□ 0.28
CPSF1-205ENST00000531042 RPLP0P6Q8NHW5 317 aa16.79■□□□□ 0.28
CPSF1-205ENST00000531042 GAB3Q8WWW8 586 aa16.79■□□□□ 0.28
CPSF1-205ENST00000531042 SLITRK1Q96PX8 696 aa16.79■□□□□ 0.28
CPSF1-205ENST00000531042 SEMA4GQ9NTN9 838 aa16.79■□□□□ 0.28
CPSF1-205ENST00000531042 POLR3BQ9NW08 1133 aaPredicted RBP16.79■□□□□ 0.28
CPSF1-205ENST00000531042 HPSEQ9Y251 543 aa16.79■□□□□ 0.28
CPSF1-205ENST00000531042 EML5Q05BV3 1969 aa16.78■□□□□ 0.28
CPSF1-205ENST00000531042 RPP40O75818 363 aaKnown RBP16.78■□□□□ 0.28
CPSF1-205ENST00000531042 ABL1P00519 1130 aa16.78■□□□□ 0.28
CPSF1-205ENST00000531042 OAS1P00973 400 aaKnown RBP16.78■□□□□ 0.28
CPSF1-205ENST00000531042 NR3C1P04150 777 aa16.78■□□□□ 0.28
CPSF1-205ENST00000531042 MYL1P05976 194 aa16.78■□□□□ 0.28
CPSF1-205ENST00000531042 RAP1GAPP47736 663 aa16.78■□□□□ 0.28
CPSF1-205ENST00000531042 DLG4P78352 724 aa16.78■□□□□ 0.28
CPSF1-205ENST00000531042 CSRP2Q16527 193 aa16.78■□□□□ 0.28
CPSF1-205ENST00000531042 NUP93Q8N1F7 819 aa16.78■□□□□ 0.28
CPSF1-205ENST00000531042 KIAA1958Q8N8K9 716 aa16.78■□□□□ 0.28
CPSF1-205ENST00000531042 ELMO3Q96BJ8 720 aa16.78■□□□□ 0.28
CPSF1-205ENST00000531042 RTKNQ9BST9 563 aa16.78■□□□□ 0.28
CPSF1-205ENST00000531042 SDCBP2Q9H190 292 aa16.78■□□□□ 0.28
CPSF1-205ENST00000531042 CPQQ9Y646 472 aa16.78■□□□□ 0.28
CPSF1-205ENST00000531042 CLSTN1O94985 981 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 RTN3O95197 1032 aaPredicted RBP16.77■□□□□ 0.28
CPSF1-205ENST00000531042 YWHAQP27348 245 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 OPRD1P41143 372 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 IFRD2Q12894 506 aaPredicted RBP16.77■□□□□ 0.28
CPSF1-205ENST00000531042 SGSM1Q2NKQ1 1148 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 GAB4Q2WGN9 574 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 SCARA5Q6ZMJ2 495 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 PRR23CQ6ZRP0 262 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 PAQR9Q6ZVX9 377 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 SYT13Q7L8C5 426 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 FILIP1Q7Z7B0 1213 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 FAM35AQ86V20 835 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 ADGRG2Q8IZP9 1017 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 TMC2Q8TDI7 906 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 CHAMP1Q96JM3 812 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 TNIP3Q96KP6 325 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 SPATA32Q96LK8 384 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 KCNK16Q96T55 309 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 ZDHHC9Q9Y397 364 aa16.77■□□□□ 0.28
CPSF1-205ENST00000531042 ATP8B3O60423 1300 aa16.76■□□□□ 0.27
CPSF1-205ENST00000531042 TNFRSF10BO14763 440 aa16.76■□□□□ 0.27
CPSF1-205ENST00000531042 RPN1P04843 607 aaKnown RBP16.76■□□□□ 0.27
CPSF1-205ENST00000531042 KRT85P78386 507 aa16.76■□□□□ 0.27
CPSF1-205ENST00000531042 ZACNQ401N2 412 aa16.76■□□□□ 0.27
CPSF1-205ENST00000531042 CACNA2D4Q7Z3S7 1137 aa16.76■□□□□ 0.27
CPSF1-205ENST00000531042 PDZD8Q8NEN9 1154 aa16.76■□□□□ 0.27
CPSF1-205ENST00000531042 NETO1Q8TDF5 533 aa16.76■□□□□ 0.27
CPSF1-205ENST00000531042 OVCA2Q8WZ82 227 aa16.76■□□□□ 0.27
CPSF1-205ENST00000531042 FBXO32Q969P5 355 aa16.76■□□□□ 0.27
CPSF1-205ENST00000531042 ACDQ96AP0 544 aa16.76■□□□□ 0.27
CPSF1-205ENST00000531042 HHIPQ96QV1 700 aa16.76■□□□□ 0.27
CPSF1-205ENST00000531042 MED10Q9BTT4 135 aa16.76■□□□□ 0.27
CPSF1-205ENST00000531042 SMPD4Q9NXE4 827 aa16.76■□□□□ 0.27
CPSF1-205ENST00000531042 IL37Q9NZH6 218 aa16.76■□□□□ 0.27
CPSF1-205ENST00000531042 SPAG17Q6Q759 2223 aa16.76■□□□□ 0.27
CPSF1-205ENST00000531042 FAM237AA0A1B0GTK4 181 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.75■□□□□ 0.27
CPSF1-205ENST00000531042 K7EQS6 105 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 SLC9A3R1O14745 358 aaPredicted RBP16.75■□□□□ 0.27
CPSF1-205ENST00000531042 IKBKBO14920 756 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 AXIN1O15169 862 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 CALUO43852 315 aaPredicted RBP16.75■□□□□ 0.27
CPSF1-205ENST00000531042 AKAP3O75969 853 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 CYP17A1P05093 508 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 CCDC192P0DO97 292 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 MBL2P11226 248 aaPredicted RBP16.75■□□□□ 0.27
CPSF1-205ENST00000531042 P4HA1P13674 534 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 SYKP43405 635 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 NDUFA8P51970 172 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 DMC1Q14565 340 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 C1orf220Q5T0J3 134 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 CEP135Q66GS9 1140 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 SV2AQ7L0J3 742 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 ACOT1Q86TX2 421 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 KBTBD6Q86V97 674 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 DDX42Q86XP3 938 aaKnown RBP eCLIP16.75■□□□□ 0.27
CPSF1-205ENST00000531042 FUKQ8N0W3 1084 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 CCDC26Q8TAB7 109 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 SCAMP5Q8TAC9 235 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 TAF4BQ92750 862 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 SMARCD1Q96GM5 515 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 LOXL4Q96JB6 756 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 DMAP1Q9NPF5 467 aaPredicted RBP16.75■□□□□ 0.27
CPSF1-205ENST00000531042 CFAP97Q9P2B7 532 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 CHORDC1Q9UHD1 332 aaPredicted RBP16.75■□□□□ 0.27
CPSF1-205ENST00000531042 TRAF3IP3Q9Y228 551 aa16.75■□□□□ 0.27
CPSF1-205ENST00000531042 DCDC2BA2VCK2 349 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms