RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PKN2Q16513 984 aaKnown RBP17.99■□□□□ 0.47
BRCA2-204ENST00000530893 SWT1Q5T5J6 900 aaKnown RBP17.99■□□□□ 0.47
BRCA2-204ENST00000530893 UNC45BQ8IWX7 931 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 UBA3Q8TBC4 463 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 TEKT4Q8WW24 435 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 RXFP2Q8WXD0 754 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 KIF12Q96FN5 646 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 L3MBTL3Q96JM7 780 aaPredicted RBP17.99■□□□□ 0.47
BRCA2-204ENST00000530893 TBCBQ99426 244 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 DHRS4Q9BTZ2 278 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 FRMD8Q9BZ67 464 aaPredicted RBP17.99■□□□□ 0.47
BRCA2-204ENST00000530893 GBA2Q9HCG7 927 aaPredicted RBP17.99■□□□□ 0.47
BRCA2-204ENST00000530893 CLUHO75153 1309 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 RALGAPA2Q2PPJ7 1873 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 E5RJQ4 531 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 GOLGA8MH3BSY2 632 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 HOXD8P13378 290 aaPredicted RBP17.99■□□□□ 0.47
BRCA2-204ENST00000530893 MNAT1P51948 309 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 RNASELQ05823 741 aaKnown RBP17.99■□□□□ 0.47
BRCA2-204ENST00000530893 CCDC15Q0P6D6 951 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 HP1BP3Q5SSJ5 553 aaPredicted RBP17.99■□□□□ 0.47
BRCA2-204ENST00000530893 FNBP1LQ5T0N5 605 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 GJC2Q5T442 439 aaPredicted RBP17.99■□□□□ 0.47
BRCA2-204ENST00000530893 ANKRD22Q5VYY1 191 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 OR6B2Q6IFH4 312 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 ADGRD1Q6QNK2 874 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 FAM183BPQ6ZVS7 135 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 CYP4V2Q6ZWL3 525 aaPredicted RBP17.99■□□□□ 0.47
BRCA2-204ENST00000530893 ZDHHC17Q8IUH5 632 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 PARP9Q8IXQ6 854 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 FAM71DQ8N9W8 422 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 PEBP4Q96S96 227 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 KATNBL1Q9H079 304 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.99■□□□□ 0.47
BRCA2-204ENST00000530893 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.99■□□□□ 0.47
BRCA2-204ENST00000530893 XPO7Q9UIA9 1087 aaKnown RBP17.99■□□□□ 0.47
BRCA2-204ENST00000530893 CHUKO15111 745 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 TYROBPO43914 113 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 ZWINTO95229 277 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 ZNF286BP0CG31 522 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 CYP2C8P10632 490 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 PCBP1Q15365 356 aaKnown RBP eCLIP17.98■□□□□ 0.47
BRCA2-204ENST00000530893 TAF5Q15542 800 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 GRIK4Q16099 956 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 PDK4Q16654 411 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 C3orf62Q6ZUJ4 267 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 ANKMY2Q8IV38 441 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 PALM2Q8IXS6 379 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 CCDC63Q8NA47 563 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 MAGEC3Q8TD91 643 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 STK32AQ8WU08 396 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 ALKBH8Q96BT7 664 aaKnown RBP17.98■□□□□ 0.47
BRCA2-204ENST00000530893 PPP1R16BQ96T49 567 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 CFAP69A5D8W1 941 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 ZNF487B1APH4 448 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 MGRN1O60291 552 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 SPAG6O75602 509 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 CYP3A5P20815 502 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 TGM2P21980 687 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 CA4P22748 312 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 FOXN2P32314 431 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 GBP2P32456 591 aaPredicted RBP17.98■□□□□ 0.47
BRCA2-204ENST00000530893 GJA5P36382 358 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 ADCYAP1R1P41586 468 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 PSMC4P43686 418 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 ADCY1Q08828 1119 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 BNIP1Q12981 228 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 ZKSCAN8Q15776 578 aaPredicted RBP17.98■□□□□ 0.47
BRCA2-204ENST00000530893 SNCBQ16143 134 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 PKDCCQ504Y2 493 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 DPY19L2Q6NUT2 758 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 DARS2Q6PI48 645 aaKnown RBP17.98■□□□□ 0.47
BRCA2-204ENST00000530893 FBXO36Q8NEA4 188 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.98■□□□□ 0.47
BRCA2-204ENST00000530893 RNF157Q96PX1 679 aa17.98■□□□□ 0.47
BRCA2-204ENST00000530893 CHADO15335 359 aa17.97■□□□□ 0.47
BRCA2-204ENST00000530893 UBOX5O94941 541 aa17.97■□□□□ 0.47
BRCA2-204ENST00000530893 PFKMP08237 780 aa17.97■□□□□ 0.47
BRCA2-204ENST00000530893 BASP1P80723 227 aaKnown RBP17.97■□□□□ 0.47
BRCA2-204ENST00000530893 MSS51Q4VC12 460 aa17.97■□□□□ 0.47
BRCA2-204ENST00000530893 FAM133BQ5BKY9 247 aaKnown RBP17.97■□□□□ 0.47
BRCA2-204ENST00000530893 MARCH8Q5T0T0 291 aa17.97■□□□□ 0.47
BRCA2-204ENST00000530893 CAPN12Q6ZSI9 719 aa17.97■□□□□ 0.47
BRCA2-204ENST00000530893 DPH6Q7L8W6 267 aa17.97■□□□□ 0.47
BRCA2-204ENST00000530893 TMEM110Q86TL2 294 aa17.97■□□□□ 0.47
BRCA2-204ENST00000530893 LRRC52Q8N7C0 313 aa17.97■□□□□ 0.47
BRCA2-204ENST00000530893 RTP4Q96DX8 246 aa17.97■□□□□ 0.47
BRCA2-204ENST00000530893 SLC10A4Q96EP9 437 aa17.97■□□□□ 0.47
BRCA2-204ENST00000530893 SLC4A5Q9BY07 1137 aa17.97■□□□□ 0.47
BRCA2-204ENST00000530893 RRN3P2A6NIE6 340 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 SPAG7O75391 227 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 TMEM63AO94886 807 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 SSTR1P30872 391 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 EPHX2P34913 555 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 SKIV2L2P42285 1042 aaKnown RBP17.96■□□□□ 0.47
BRCA2-204ENST00000530893 GCLCP48506 637 aaPredicted RBP17.96■□□□□ 0.47
BRCA2-204ENST00000530893 KRT81Q14533 505 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 GOLGA7BQ2TAP0 167 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 CGB2Q6NT52 195 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 TRNP1Q6NT89 227 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms