RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 RPL10P27635 214 aaKnown RBP14.71□□□□□ -0.05
PCF11-204ENST00000530660 PEX3P56589 373 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 IRX4P78413 519 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 BST1Q10588 318 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 SF3B3Q15393 1217 aaKnown RBP14.71□□□□□ -0.05
PCF11-204ENST00000530660 KCNJ8Q15842 424 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 UBE2SQ16763 222 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 EFHC2Q5JST6 749 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 FAM209AQ5JX71 171 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 ZNF804AQ7Z570 1209 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 DEFB107AQ8IZN7 70 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 BORCS5Q969J3 196 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 WWP1Q9H0M0 922 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 SSU72Q9NP77 194 aaKnown RBP14.71□□□□□ -0.05
PCF11-204ENST00000530660 UBE2TQ9NPD8 197 aaPredicted RBP14.71□□□□□ -0.05
PCF11-204ENST00000530660 KIAA1551Q9HCM1 1747 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 SOBPA7XYQ1 873 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 SFI1A8K8P3 1242 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 FAM47E-STBD1D6RA91 191 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 UGT1A9O60656 530 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 DHRS4L1P0CG22 281 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 UGT1A6P19224 532 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 UGT1A1P22309 533 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 UGT1A4P22310 534 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 MZF1P28698 734 aaPredicted RBP14.71□□□□□ -0.05
PCF11-204ENST00000530660 UGT1A3P35503 534 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 UGT1A5P35504 534 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 PSMC6P62333 389 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 ZNF829Q3KNS6 432 aaPredicted RBP14.71□□□□□ -0.05
PCF11-204ENST00000530660 NIPAL1Q6NVV3 410 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 PGM2L1Q6PCE3 622 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 RTKN2Q8IZC4 609 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 JADE3Q92613 823 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 THAP11Q96EK4 314 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 BHMT2Q9H2M3 363 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 CAAP1Q9H8G2 361 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 UGT1A7Q9HAW7 530 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 UGT1A10Q9HAW8 530 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 UGT1A8Q9HAW9 530 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 PCDHA12Q9UN75 941 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 LOC100653049A0A140TA62 436 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 A6NL46 340 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 EML1O00423 815 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 GNPATO15228 680 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 KRT34O76011 436 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 GCNT3O95395 438 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 SGPL1O95470 568 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 TMPRSS15P98073 1019 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 COG2Q14746 738 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 RDH13Q8NBN7 331 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 KAT5Q92993 513 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 C20orf27Q9GZN8 174 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 EHD1Q9H4M9 534 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 IGSF9Q9P2J2 1179 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 STRIP2Q9ULQ0 834 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 POLIQ9UNA4 740 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 CDC14AQ9UNH5 594 aa14.71□□□□□ -0.06
PCF11-204ENST00000530660 CLUHO75153 1309 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 DENND3A2RUS2 1198 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 PSMD12O00232 456 aaPredicted RBP14.7□□□□□ -0.06
PCF11-204ENST00000530660 MT-ND3P03897 115 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 ATF3P18847 181 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 MSX2P35548 267 aaPredicted RBP14.7□□□□□ -0.06
PCF11-204ENST00000530660 GJC1P36383 396 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 STAT3P40763 770 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 GPS1Q13098 491 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 CDHR3Q6ZTQ4 885 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 TAB3Q8N5C8 712 aaPredicted RBP14.7□□□□□ -0.06
PCF11-204ENST00000530660 RPGRQ92834 1020 aaKnown RBP14.7□□□□□ -0.06
PCF11-204ENST00000530660 C12orf43Q96C57 262 aaKnown RBP14.7□□□□□ -0.06
PCF11-204ENST00000530660 REEP2Q9BRK0 252 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 NCKIPSDQ9NZQ3 722 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 FRMPD2Q68DX3 1309 aaPredicted RBP14.7□□□□□ -0.06
PCF11-204ENST00000530660 MCF2LO15068 1137 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 AQP9O43315 295 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 CD247P20963 164 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 HMOX2P30519 316 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 ORC2Q13416 577 aaPredicted RBP14.7□□□□□ -0.06
PCF11-204ENST00000530660 MYBPC2Q14324 1141 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 CHSY1Q86X52 802 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 WRNIP1Q96S55 665 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 COPS7BQ9H9Q2 264 aaPredicted RBP14.7□□□□□ -0.06
PCF11-204ENST00000530660 GIN1Q9NXP7 522 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 ITM2BQ9Y287 266 aa14.7□□□□□ -0.06
PCF11-204ENST00000530660 H0YIN7 160 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 FDX1P10109 184 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 ALDH3B2P48448 385 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 PSMC1P62191 440 aaKnown RBP14.69□□□□□ -0.06
PCF11-204ENST00000530660 PHKG1Q16816 387 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 ISOC1Q96CN7 298 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 LRGUKQ96M69 825 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 TRIM56Q9BRZ2 755 aaKnown RBP14.69□□□□□ -0.06
PCF11-204ENST00000530660 ZBTB21Q9ULJ3 1066 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 MINPP1Q9UNW1 487 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 CORINQ9Y5Q5 1042 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 USP17L5A8MUK1 530 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 CYB561D2O14569 222 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 ALOX15BO15296 676 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 TCF7P36402 384 aaPredicted RBP14.69□□□□□ -0.06
PCF11-204ENST00000530660 GSSP48637 474 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms