RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 UBA1P22314 1058 aaKnown RBP13.08□□□□□ -0.32
PDE4DIP-227ENST00000529945 XRCC4Q13426 336 aa13.08□□□□□ -0.32
PDE4DIP-227ENST00000529945 MIIPQ5JXC2 388 aa13.08□□□□□ -0.32
PDE4DIP-227ENST00000529945 BEST2Q8NFU1 509 aa13.08□□□□□ -0.32
PDE4DIP-227ENST00000529945 CYTH4Q9UIA0 394 aa13.08□□□□□ -0.32
PDE4DIP-227ENST00000529945 PTX3P26022 381 aaPredicted RBP13.08□□□□□ -0.32
PDE4DIP-227ENST00000529945 PTPN7P35236 360 aa13.08□□□□□ -0.32
PDE4DIP-227ENST00000529945 SCTRP47872 440 aa13.08□□□□□ -0.32
PDE4DIP-227ENST00000529945 OMPP47874 163 aa13.08□□□□□ -0.32
PDE4DIP-227ENST00000529945 CDKL3Q8IVW4 592 aaPredicted RBP13.08□□□□□ -0.32
PDE4DIP-227ENST00000529945 SENP7Q9BQF6 1050 aa13.08□□□□□ -0.32
PDE4DIP-227ENST00000529945 ARL5AQ9Y689 179 aa13.08□□□□□ -0.32
PDE4DIP-227ENST00000529945 H3BM21 787 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 SURF1Q15526 300 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 GORASP1Q9BQQ3 440 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 CHCHD6Q9BRQ6 235 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 NR5A2O00482 541 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 H2AFYO75367 372 aaKnown RBP13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 RGS4P49798 205 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 RPS8P62241 208 aaKnown RBP13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 CBLBQ13191 982 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 EFHC2Q5JST6 749 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 SGF29Q96ES7 293 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 ARMC7Q9H6L4 198 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 ZSWIM6Q9HCJ5 1215 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 PRKAG2Q9UGJ0 569 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 ZNF225Q9UK10 706 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 NUDT5Q9UKK9 219 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 HS6ST1O60243 411 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 RFC5P40937 340 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 RGS6P49758 472 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 PABPC1LQ4VXU2 614 aaKnown RBP13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 BNC2Q6ZN30 1099 aaPredicted RBP13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 FAM220AQ7Z4H9 259 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 CMTR2Q8IYT2 770 aaKnown RBP13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 CAMKK2Q96RR4 588 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 SNX9Q9Y5X1 595 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 PNMA6EA0A0J9YXQ4 647 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 TMEM120BA0PK00 339 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 SLC33A1O00400 549 aaPredicted RBP13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 PDHBP11177 359 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 PABPC1P11940 636 aaKnown RBP13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 GRK4P32298 578 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 PRKG2Q13237 762 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 GET4Q7L5D6 327 aaPredicted RBP13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 ZNF605Q86T29 641 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 ZNF655Q8N720 491 aaPredicted RBP13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 PFDN5Q99471 154 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 MMADHCQ9H3L0 296 aaPredicted RBP13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 GNPTGQ9UJJ9 305 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 CHURC1-FNTBB4DL54 471 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 NOL4O94818 638 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 BCAR1P56945 870 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 EIF4A2Q14240 407 aaKnown RBP13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 EFCAB1Q9HAE3 211 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 GPN1Q9HCN4 374 aaPredicted RBP13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 ZNF221Q9UK13 617 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 TRIM64CA6NLI5 447 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 WRBO00258 174 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 CDH16O75309 829 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 IL18R1Q13478 541 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 KCNA10Q16322 511 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 BICRALQ6AI39 1079 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 CLYBLQ8N0X4 340 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 SMYD1Q8NB12 490 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 AK8Q96MA6 479 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 TDRD1Q9BXT4 1180 aaKnown RBP13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 TOR4AQ9NXH8 423 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 NOS1P29475 1434 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 SCAMP1O15126 338 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 ATP13A4Q4VNC1 1196 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 SUGP1Q8IWZ8 645 aaKnown RBP13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 SNX7Q9UNH6 387 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 GRIP1Q9Y3R0 1128 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 SPACA6W5XKT8 324 aa13.07□□□□□ -0.32
PDE4DIP-227ENST00000529945 XIAPP98170 497 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 CLEC16AQ2KHT3 1053 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 MMGT1Q8N4V1 131 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 GIPC3Q8TF64 312 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 ZNF333Q96JL9 665 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 SERPINB12Q96P63 405 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 WDR35Q9P2L0 1181 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 REXO2Q9Y3B8 237 aaKnown RBP13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 TRIM64A6NGJ6 449 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 CRKP46108 304 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 TIMM10P62072 90 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 ZNF438Q7Z4V0 828 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 TTYH1Q9H313 450 aaPredicted RBP13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 CYP4F2P78329 520 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 CYP4F3Q08477 520 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 FAM98BQ52LJ0 330 aaKnown RBP13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 PTRHD1Q6GMV3 140 aaKnown RBP13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 ARMC6Q6NXE6 501 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 DHX35Q9H5Z1 703 aaKnown RBP13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 LYVE1Q9Y5Y7 322 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 PTH1RQ03431 593 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 TCHHL1Q5QJ38 904 aaPredicted RBP13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 TMEM270Q6UE05 265 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 GRAMD1CQ8IYS0 662 aa13.06□□□□□ -0.32
PDE4DIP-227ENST00000529945 GPRASP2Q96D09 838 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms