RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 OPHN1O60890 802 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 DNAJC6O75061 913 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 VNN1O95497 513 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 SUPT20HL2P0C7V6 817 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 GEMIN4P57678 1058 aaKnown RBP14.83□□□□□ -0.04
USP48-213ENST00000529637 CNTN2Q02246 1040 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 DEUP1Q05D60 604 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 MAMLD1Q13495 774 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 SUPT20HL1Q3ZLR7 823 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 DCAF15Q66K64 600 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 XRRA1Q6P2D8 792 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 ABRAQ8N0Z2 381 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 FAM111AQ96PZ2 611 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 PAFAH2Q99487 392 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 MMADHCQ9H3L0 296 aaPredicted RBP14.83□□□□□ -0.04
USP48-213ENST00000529637 HSFX1Q9UBD0 423 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 TBC1D30Q9Y2I9 924 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 LIASO43766 372 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 C4BPAP04003 597 aaKnown RBP14.82□□□□□ -0.04
USP48-213ENST00000529637 GLRA2P23416 452 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 OSTNP61366 133 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 DYNLT1P63172 113 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 NOMO3P69849 1222 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 SP2Q02086 613 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 GHRHRQ02643 423 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 LPCAT4Q643R3 524 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 MON1BQ7L1V2 547 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 ZNF677Q86XU0 584 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 DTNBP1Q96EV8 351 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 RHBDL2Q9NX52 303 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 NDE1Q9NXR1 346 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 ANGPTL2Q9UKU9 493 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 ZNF541Q9H0D2 1346 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 A8MXQ7 604 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 BUD23O43709 281 aaKnown RBP14.82□□□□□ -0.04
USP48-213ENST00000529637 SORBS2O94875 1100 aaKnown RBP14.82□□□□□ -0.04
USP48-213ENST00000529637 SRGAP2CP0DJJ0 459 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 CRABP2P29373 138 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 RAP1GDS1P52306 607 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 EFHC2Q5JST6 749 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 ANKRD22Q5VYY1 191 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 ABHD15Q6UXT9 468 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 MYLK4Q86YV6 388 aaPredicted RBP14.82□□□□□ -0.04
USP48-213ENST00000529637 SCUBE1Q8IWY4 988 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 ULK2Q8IYT8 1036 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.82□□□□□ -0.04
USP48-213ENST00000529637 NAT14Q8WUY8 206 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 TMEM121Q9BTD3 319 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 PIM2Q9P1W9 311 aa14.82□□□□□ -0.04
USP48-213ENST00000529637 ZNF214Q9UL59 606 aaPredicted RBP14.82□□□□□ -0.04
USP48-213ENST00000529637 ZSCAN9O15535 394 aaPredicted RBP14.81□□□□□ -0.04
USP48-213ENST00000529637 STBD1O95210 358 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 PRKD1Q15139 912 aaPredicted RBP14.81□□□□□ -0.04
USP48-213ENST00000529637 SFT2D3Q587I9 215 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 FNBP1LQ5T0N5 605 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 SCARA3Q6AZY7 606 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 SPATA24Q86W54 205 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 ARHGAP18Q8N392 663 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 PYDC1Q8WXC3 89 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 ZBED3Q96IU2 234 aaPredicted RBP14.81□□□□□ -0.04
USP48-213ENST00000529637 MCEEQ96PE7 176 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 CENPKQ9BS16 269 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 VPS11Q9H270 941 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 SAE1Q9UBE0 346 aaPredicted RBP14.81□□□□□ -0.04
USP48-213ENST00000529637 MTO1Q9Y2Z2 717 aaKnown RBP14.81□□□□□ -0.04
USP48-213ENST00000529637 SCINQ9Y6U3 715 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 COMMD3-BMI1R4GMX3 469 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 OATP04181 439 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 CD19P15391 556 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 FSTL1Q12841 308 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 NFX1Q12986 1120 aaKnown RBP14.81□□□□□ -0.04
USP48-213ENST00000529637 KRT72Q14CN4 511 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 RNASEH2BQ5TBB1 312 aaKnown RBP14.81□□□□□ -0.04
USP48-213ENST00000529637 DNAJC24Q6P3W2 148 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 C3orf62Q6ZUJ4 267 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 HIC2Q96JB3 615 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 SERAC1Q96JX3 654 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 MECRQ9BV79 373 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 HAPLN2Q9GZV7 340 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 SLC24A2Q9UI40 661 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 PLA2G4CQ9UP65 541 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 KAT6AQ92794 2004 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 MEI4A8MW99 385 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 PGM3O95394 542 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 WEE2P0C1S8 567 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 PTPRAP18433 802 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 ACTR3P61158 418 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 TFAMQ00059 246 aaKnown RBP14.81□□□□□ -0.04
USP48-213ENST00000529637 STXBP2Q15833 593 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 C1orf146Q5VVC0 180 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 CES4AQ5XG92 561 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 SLFN12LQ6IEE8 588 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 GSTCDQ8NEC7 633 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 CCDC110Q8TBZ0 833 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 ZNF606Q8WXB4 792 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 TUBB6Q9BUF5 446 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 PARVAQ9NVD7 372 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 MARCOQ9UEW3 520 aaPredicted RBP14.81□□□□□ -0.04
USP48-213ENST00000529637 SLC4A7Q9Y6M7 1214 aa14.81□□□□□ -0.04
USP48-213ENST00000529637 KITP10721 976 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms