RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 DUSP9Q99956 384 aaKnown RBP12.81□□□□□ -0.36
COPB1-206ENST00000529210 IMPG2Q9BZV3 1241 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 APOBEC3GQ9HC16 384 aaKnown RBP12.81□□□□□ -0.36
COPB1-206ENST00000529210 DMAP1Q9NPF5 467 aaPredicted RBP12.81□□□□□ -0.36
COPB1-206ENST00000529210 ZSCAN32Q9NX65 697 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 PTPRZ1P23471 2315 aaPredicted RBP12.8□□□□□ -0.36
COPB1-206ENST00000529210 OTOGLQ3ZCN5 2332 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 WDR87Q6ZQQ6 2873 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 OTOL1A6NHN0 477 aaPredicted RBP12.8□□□□□ -0.36
COPB1-206ENST00000529210 CLDN5O00501 218 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 STX10O60499 249 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 CILPO75339 1184 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 CKMP06732 381 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 ZDHHC11BP0C7U3 371 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 TRIM49P0CI25 452 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 TRIM49CP0CI26 452 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 EPB41P11171 864 aaKnown RBP12.8□□□□□ -0.36
COPB1-206ENST00000529210 HDCP19113 662 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 YWHAQP27348 245 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 HOXA6P31267 233 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 PPP1R2P41236 205 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 RAP1GAPP47736 663 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 SOX9P48436 509 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 GCLMP48507 274 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 TUBP50607 506 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 NRLP54845 237 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 ZXDBP98169 803 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 CSTF1Q05048 431 aaKnown RBP12.8□□□□□ -0.36
COPB1-206ENST00000529210 TAF10Q12962 218 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 GAS6Q14393 721 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 PPP2R5DQ14738 602 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 TMEM196Q5HYL7 178 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 SPOPLQ6IQ16 392 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 CC2D1AQ6P1N0 951 aaPredicted RBP12.8□□□□□ -0.36
COPB1-206ENST00000529210 SCARA5Q6ZMJ2 495 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 ADSSL1Q8N142 457 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 ARL14EPQ8N8R7 260 aaPredicted RBP12.8□□□□□ -0.36
COPB1-206ENST00000529210 ZMIZ2Q8NF64 920 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 SMARCE1Q969G3 411 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 CYP2S1Q96SQ9 504 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 NIF3L1Q9GZT8 377 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 TRPC7Q9HCX4 862 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 PNPLA8Q9NP80 782 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 COQ4Q9Y3A0 265 aa12.8□□□□□ -0.36
COPB1-206ENST00000529210 FRYLO94915 3013 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 TRIM21P19474 475 aaKnown RBP12.79□□□□□ -0.36
COPB1-206ENST00000529210 SLC5A3P53794 718 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 EML3Q32P44 896 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 ACOT1Q86TX2 421 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 TTC39CQ8N584 583 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 SUMF1Q8NBK3 374 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 FBXL13Q8NEE6 735 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 SH3RF2Q8TEC5 729 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 ATP2A3Q93084 1043 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 EXOC4Q96A65 974 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 KCNK16Q96T55 309 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 HNRNPABQ99729 332 aaKnown RBP12.79□□□□□ -0.36
COPB1-206ENST00000529210 TSG101Q99816 390 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 SMOQ99835 787 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 NT5C1AQ9BXI3 368 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 EBF3Q9H4W6 596 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 ECT2Q9H8V3 914 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 HMGXB4Q9UGU5 601 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 SSUH2Q9Y2M2 353 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 R4GN57 208 aa12.79□□□□□ -0.36
COPB1-206ENST00000529210 PMM2O15305 246 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 KINO60870 393 aaKnown RBP12.78□□□□□ -0.36
COPB1-206ENST00000529210 AP1G2O75843 785 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 GJA4P35212 333 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 CXCL12P48061 93 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 MXI1P50539 228 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 PMS1P54277 932 aaKnown RBP12.78□□□□□ -0.36
COPB1-206ENST00000529210 PON2Q15165 354 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 ANKRD40Q6AI12 368 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 TRIM68Q6AZZ1 485 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 DDX42Q86XP3 938 aaKnown RBP eCLIP12.78□□□□□ -0.362e-15■■■■■ 26.8
COPB1-206ENST00000529210 CPA6Q8N4T0 437 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 CCDC150Q8NCX0 1101 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 SLC2A14Q8TDB8 520 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 WHAMMQ8TF30 809 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 FBXO32Q969P5 355 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 ELMO3Q96BJ8 720 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 DHTKD1Q96HY7 919 aaPredicted RBP12.78□□□□□ -0.36
COPB1-206ENST00000529210 TWNKQ96RR1 684 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 RNF38Q9H0F5 515 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 EPC1Q9H2F5 836 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 FBXO44Q9H4M3 255 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 RAB20Q9NX57 234 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 DUS2Q9NX74 493 aaKnown RBP12.78□□□□□ -0.36
COPB1-206ENST00000529210 EP300Q09472 2414 aaPredicted RBP12.78□□□□□ -0.36
COPB1-206ENST00000529210 MYH10P35580 1976 aa12.78□□□□□ -0.36
COPB1-206ENST00000529210 CHURC1-FNTBB4DL54 471 aa12.77□□□□□ -0.37
COPB1-206ENST00000529210 LEFTY2O00292 366 aa12.77□□□□□ -0.37
COPB1-206ENST00000529210 PSMA7O14818 248 aa12.77□□□□□ -0.37
COPB1-206ENST00000529210 FAM200BP0CF97 657 aa12.77□□□□□ -0.37
COPB1-206ENST00000529210 ARSAP15289 507 aa12.77□□□□□ -0.37
COPB1-206ENST00000529210 DRD1P21728 446 aa12.77□□□□□ -0.37
COPB1-206ENST00000529210 IFNAR2P48551 515 aa12.77□□□□□ -0.37
COPB1-206ENST00000529210 GRSF1Q12849 480 aaKnown RBP eCLIP12.77□□□□□ -0.37
COPB1-206ENST00000529210 STIM1Q13586 685 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms