RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 DARS2Q6PI48 645 aaKnown RBP5.82□□□□□ -1.48
CSDE1-212ENST00000529046 SH2D3CQ8N5H7 860 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 AOPEPQ8N6M6 819 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 PJA1Q8NG27 643 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 LRTOMTQ8WZ04 291 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 CCDC136Q96JN2 1154 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 PNKPQ96T60 521 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 TLR10Q9BXR5 811 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 WDR11Q9BZH6 1224 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 REXO4Q9GZR2 422 aaKnown RBP5.82□□□□□ -1.48
CSDE1-212ENST00000529046 BTBD1Q9H0C5 482 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 ETAA1Q9NY74 926 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 CTTNBP2NLQ9P2B4 639 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 KCNE5Q9UJ90 142 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 PCDHA6Q9UN73 950 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 PKD1L3Q7Z443 1732 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 DOT1LQ8TEK3 1739 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 CHD4Q14839 1912 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 UTRNP46939 3433 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 UNC119BA6NIH7 251 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 RPL17P18621 184 aaKnown RBP5.81□□□□□ -1.48
CSDE1-212ENST00000529046 FGFR4P22455 802 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 C1QTNF8P60827 252 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 EXOSC9Q06265 439 aaKnown RBP5.81□□□□□ -1.48
CSDE1-212ENST00000529046 TSHZ3Q63HK5 1081 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 ARMC6Q6NXE6 501 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 Q6YL49 198 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 LCORLQ8N3X6 602 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 PDPRQ8NCN5 879 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 BEND2Q8NDZ0 799 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 SUPT20HQ8NEM7 779 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 TNPO1Q92973 898 aaKnown RBP5.81□□□□□ -1.48
CSDE1-212ENST00000529046 MARS2Q96GW9 593 aaKnown RBP5.81□□□□□ -1.48
CSDE1-212ENST00000529046 APIPQ96GX9 242 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 SLC39A13Q96H72 371 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 LRIG1Q96JA1 1093 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 MSLNLQ96KJ4 702 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 TINAGL1Q9GZM7 467 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-212ENST00000529046 ZNF700Q9H0M5 742 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-212ENST00000529046 STAP2Q9UGK3 403 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 AGAP1Q9UPQ3 857 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 MAP3K2Q9Y2U5 619 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 ZNF831Q5JPB2 1677 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 KIF20BQ96Q89 1820 aa5.81□□□□□ -1.48
CSDE1-212ENST00000529046 RGPD2P0DJD1 1756 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 A0A1W2PPL8 197 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 E7ENX8 843 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 TBX3O15119 743 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 THP07101 528 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 AVPR1BP47901 424 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 TOB1P50616 345 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-212ENST00000529046 NANOS3P60323 173 aaKnown RBP5.8□□□□□ -1.48
CSDE1-212ENST00000529046 TAP2Q03519 686 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 EIF4A2Q14240 407 aaKnown RBP5.8□□□□□ -1.48
CSDE1-212ENST00000529046 KIAA0753Q2KHM9 967 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 CCDC149Q6ZUS6 474 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 MAPKAPK5Q8IW41 473 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 DNAJC10Q8IXB1 793 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 CFAP52Q8N1V2 620 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 TMEM132CQ8N3T6 1108 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 POC1BQ8TC44 478 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 BOD1Q96IK1 185 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 ADAM2Q99965 735 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 TOR3AQ9H497 397 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 SMURF2Q9HAU4 748 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 TMOD3Q9NYL9 352 aa5.8□□□□□ -1.48
CSDE1-212ENST00000529046 C5P01031 1676 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 MAP2P11137 1827 aaKnown RBP5.79□□□□□ -1.48
CSDE1-212ENST00000529046 CCDC194A0A1B0GVG4 234 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 A0A1W2PS29 197 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 MYADML2A6NDP7 307 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 ZNF785A8K8V0 405 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 PPFIA2O75334 1257 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 ZFPL1O95159 310 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 LMNAP02545 664 aaKnown RBP5.79□□□□□ -1.48
CSDE1-212ENST00000529046 MYL1P05976 194 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 PIM1P11309 404 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-212ENST00000529046 BMP5P22003 454 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 PEX2P28328 305 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 ZNF135P52742 658 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-212ENST00000529046 RESTQ13127 1097 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 TP53BP2Q13625 1128 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 SAFBQ15424 915 aaKnown RBP eCLIP5.79□□□□□ -1.48
CSDE1-212ENST00000529046 MAP9Q49MG5 647 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 PLEKHO1Q53GL0 409 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-212ENST00000529046 NOL8Q76FK4 1167 aaKnown RBP5.79□□□□□ -1.48
CSDE1-212ENST00000529046 C11orf96Q7Z7L8 435 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 GPR150Q8NGU9 434 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 MAML1Q92585 1016 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 NMD3Q96D46 503 aaKnown RBP5.79□□□□□ -1.48
CSDE1-212ENST00000529046 SUCLG2Q96I99 432 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 SIK2Q9H0K1 926 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 PANK3Q9H999 370 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 USP25Q9UHP3 1055 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 ASAP1Q9ULH1 1129 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 TPCN1Q9ULQ1 816 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 NEU2Q9Y3R4 380 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 PLEKHM1Q9Y4G2 1056 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 C4BP0C0L5 1744 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms