RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CLEC4GQ6UXB4 293 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 SDR16C5Q8N3Y7 309 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 ATP11CQ8NB49 1132 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 CAGE1Q8TC20 777 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 XAGE5Q8WWM1 108 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 ARHGEF3Q9NR81 526 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 CHST12Q9NRB3 414 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 IL17RBQ9NRM6 502 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 TRMT13Q9NUP7 481 aaKnown RBP6.95□□□□□ -1.3
PCF11-202ENST00000528336 DNMT3BQ9UBC3 853 aaKnown RBP6.95□□□□□ -1.3
PCF11-202ENST00000528336 CCNL1Q9UK58 526 aaPredicted RBP6.95□□□□□ -1.3
PCF11-202ENST00000528336 CCP110O43303 1012 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 THAP12O43422 761 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 PIAS2O75928 621 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 URI1O94763 535 aaPredicted RBP6.94□□□□□ -1.3
PCF11-202ENST00000528336 NXPH3O95157 252 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 IL6RP08887 468 aaPredicted RBP6.94□□□□□ -1.3
PCF11-202ENST00000528336 EBLN1P0CF75 366 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 TSHRP16473 764 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 PAX3P23760 479 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 PRKAR1BP31321 381 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 ATXN1P54253 815 aaKnown RBP6.94□□□□□ -1.3
PCF11-202ENST00000528336 AK2P54819 239 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 COL10A1Q03692 680 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 PLAC9Q5JTB6 97 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 SYCP2LQ5T4T6 812 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 FCRL6Q6DN72 434 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 IZUMO1Q8IYV9 350 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 SIMC1Q8NDZ2 872 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 SMCR8Q8TEV9 937 aaPredicted RBP6.94□□□□□ -1.3
PCF11-202ENST00000528336 PNISRQ8TF01 805 aaKnown RBP6.94□□□□□ -1.3
PCF11-202ENST00000528336 TNIP3Q96KP6 325 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 CCDC138Q96M89 665 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 RIPOR3Q96MK2 946 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 C17orf80Q9BSJ5 609 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 SYNPO2LQ9H987 977 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 AS3MTQ9HBK9 375 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 ZNHIT2Q9UHR6 403 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 TLK1Q9UKI8 766 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 KAT6AQ92794 2004 aa6.94□□□□□ -1.3
PCF11-202ENST00000528336 FER1L4A9Z1Z3 1794 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 APOL1O14791 398 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 SH3BP5O60239 455 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 INMTO95050 263 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 TTLL1O95922 423 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 HGFP14210 728 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 PTH2RP49190 550 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 BIRC2Q13490 618 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 CCNIQ14094 377 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 KCNAB1Q14722 419 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 PRR16Q569H4 304 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 FAM209BQ5JX69 171 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 AKNAD1Q5T1N1 836 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 TSTD2Q5T7W7 516 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 SLC9A4Q6AI14 798 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 PLAG1Q6DJT9 500 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 ZNF551Q7Z340 670 aaPredicted RBP6.93□□□□□ -1.3
PCF11-202ENST00000528336 LRRC71Q8N4P6 559 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 RNF152Q8N8N0 203 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 LRRC46Q96FV0 321 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 ZBTB45Q96K62 511 aaPredicted RBP6.93□□□□□ -1.3
PCF11-202ENST00000528336 RPS6KC1Q96S38 1066 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 HAPLN3Q96S86 360 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 MYD88Q99836 296 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 DUSP26Q9BV47 211 aa6.93□□□□□ -1.3
PCF11-202ENST00000528336 DHX36Q9H2U1 1008 aaKnown RBP6.93□□□□□ -1.3
PCF11-202ENST00000528336 NCK2O43639 380 aa6.92□□□□□ -1.3
PCF11-202ENST00000528336 LMNAP02545 664 aaKnown RBP6.92□□□□□ -1.3
PCF11-202ENST00000528336 A1BGP04217 495 aa6.92□□□□□ -1.3
PCF11-202ENST00000528336 IFIT2P09913 472 aaKnown RBP6.92□□□□□ -1.3
PCF11-202ENST00000528336 NDUFB7P17568 137 aa6.92□□□□□ -1.3
PCF11-202ENST00000528336 PTMSP20962 102 aa6.92□□□□□ -1.3
PCF11-202ENST00000528336 BMP5P22003 454 aa6.92□□□□□ -1.3
PCF11-202ENST00000528336 TNFSF4P23510 183 aa6.92□□□□□ -1.3
PCF11-202ENST00000528336 CYP2C18P33260 490 aa6.92□□□□□ -1.3
PCF11-202ENST00000528336 ZNF750Q32MQ0 723 aa6.92□□□□□ -1.3
PCF11-202ENST00000528336 CERCAMQ5T4B2 595 aa6.92□□□□□ -1.3
PCF11-202ENST00000528336 DPP9Q86TI2 863 aa6.92□□□□□ -1.3
PCF11-202ENST00000528336 CAND1Q86VP6 1230 aaKnown RBP6.92□□□□□ -1.3
PCF11-202ENST00000528336 GPATCH11Q8N954 259 aa6.92□□□□□ -1.3
PCF11-202ENST00000528336 TRIM5Q9C035 493 aa6.92□□□□□ -1.3
PCF11-202ENST00000528336 STARD7Q9NQZ5 370 aa6.92□□□□□ -1.3
PCF11-202ENST00000528336 FNIP2Q9P278 1114 aa6.92□□□□□ -1.3
PCF11-202ENST00000528336 DKK4Q9UBT3 224 aa6.92□□□□□ -1.3
PCF11-202ENST00000528336 CCDC88BA6NC98 1476 aa6.92□□□□□ -1.3
PCF11-202ENST00000528336 CD3EAPO15446 510 aaKnown RBP6.91□□□□□ -1.3
PCF11-202ENST00000528336 ONECUT2O95948 504 aa6.91□□□□□ -1.3
PCF11-202ENST00000528336 NUDT3O95989 172 aa6.91□□□□□ -1.3
PCF11-202ENST00000528336 JUPP14923 745 aa6.91□□□□□ -1.3
PCF11-202ENST00000528336 FGFR2P21802 821 aa6.91□□□□□ -1.3
PCF11-202ENST00000528336 UQCRC1P31930 480 aa6.91□□□□□ -1.3
PCF11-202ENST00000528336 ALDH5A1P51649 535 aaPredicted RBP6.91□□□□□ -1.3
PCF11-202ENST00000528336 BCAT1P54687 386 aa6.91□□□□□ -1.3
PCF11-202ENST00000528336 FAM153CQ494X1 144 aa6.91□□□□□ -1.3
PCF11-202ENST00000528336 HIBCHQ6NVY1 386 aaPredicted RBP6.91□□□□□ -1.3
PCF11-202ENST00000528336 SRLQ86TD4 932 aa6.91□□□□□ -1.3
PCF11-202ENST00000528336 RASAL3Q86YV0 1011 aa6.91□□□□□ -1.3
PCF11-202ENST00000528336 TXLNBQ8N3L3 684 aa6.91□□□□□ -1.3
PCF11-202ENST00000528336 DPCDQ9BVM2 203 aaPredicted RBP6.91□□□□□ -1.3
PCF11-202ENST00000528336 KRTAP4-11Q9BYQ6 195 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms