RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 WDR27A2RRH5 827 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 ANHXE9PGG2 379 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 CCL16O15467 120 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 RTN2O75298 545 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 CYP11A1P05108 521 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 PDGFRBP09619 1106 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 GZMAP12544 262 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 TYMPP19971 482 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 BRD2P25440 801 aaKnown RBP13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 AVPR2P30518 371 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 GBP2P32456 591 aaPredicted RBP13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 VAV2P52735 878 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 VCPP55072 806 aaKnown RBP13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 KIF5AQ12840 1032 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 STILQ15468 1287 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 ARHGAP29Q52LW3 1261 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 THEM5Q8N1Q8 247 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 SLC44A3Q8N4M1 653 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 TWNKQ96RR1 684 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 TSGA10Q9BZW7 698 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 DNMT3BQ9UBC3 853 aaKnown RBP13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 HMGXB4Q9UGU5 601 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 REXO2Q9Y3B8 237 aaKnown RBP13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 CEP83Q9Y592 693 aa13.42□□□□□ -0.26
SSSCA1-203ENST00000526877 TMCO5BA8MYB1 307 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 H7C4K7 107 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 GABRDO14764 452 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 ZNF263O14978 683 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 OAZ2O95190 189 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 SEC24AO95486 1093 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 CALCAP01258 141 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 H2AFZP0C0S5 128 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 ATF2P15336 505 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 FSHRP23945 695 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 PCSK1P29120 753 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 ORC1Q13415 861 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 CNGA2Q16280 664 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 CLEC16AQ2KHT3 1053 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 H2AFVQ71UI9 128 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 ACOT1Q86TX2 421 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 SUGP1Q8IWZ8 645 aaKnown RBP13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 REXO1L1PQ8IX06 675 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 TCEAL8Q8IYN2 117 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 CRYBG2Q8N1P7 616 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 C17orf53Q8N3J3 647 aaPredicted RBP13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 PRSS33Q8NF86 280 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 NXPE3Q969Y0 559 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 PPP1R13BQ96KQ4 1090 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 PCDHB18PQ96TA0 734 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 HCFC1R1Q9NWW0 138 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 DDX43Q9NXZ2 648 aaKnown RBP13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 INTUQ9ULD6 942 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 PCDHGC3Q9UN70 934 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 DUSP12Q9UNI6 340 aa13.41□□□□□ -0.26
SSSCA1-203ENST00000526877 ATP8B3O60423 1300 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 MYH10P35580 1976 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 NARSO43776 548 aaKnown RBP13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 KRT86O43790 486 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 ZNF500O60304 480 aaPredicted RBP13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 XYLBO75191 536 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 LSM8O95777 96 aaKnown RBP13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 FTLP02792 175 aaPredicted RBP13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 CYP1A1P04798 512 aaPredicted RBP13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 NPR3P17342 541 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 LMO2P25791 158 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 HOXD11P31277 338 aaPredicted RBP13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 HTR4Q13639 388 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 CTXN3Q4LDR2 81 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 TPGS2Q68CL5 300 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 ACAD10Q6JQN1 1059 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 POTEHQ6S545 545 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 ZNF662Q6ZS27 426 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 GET4Q7L5D6 327 aaPredicted RBP13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 OSTM1Q86WC4 334 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 TMEM35BQ8NCS4 154 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 ITFG1Q8TB96 612 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 TFAP2BQ92481 460 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 ZNF518BQ9C0D4 1074 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 ISCUQ9H1K1 167 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 CDH9Q9ULB4 789 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 CDH7Q9ULB5 785 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 NENFQ9UMX5 172 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 TIMM13Q9Y5L4 95 aaPredicted RBP13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 ZFP37Q9Y6Q3 630 aaPredicted RBP13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 TSC2P49815 1807 aa13.4□□□□□ -0.26
SSSCA1-203ENST00000526877 USP27XA6NNY8 438 aa13.39□□□□□ -0.27
SSSCA1-203ENST00000526877 PJA2O43164 708 aa13.39□□□□□ -0.27
SSSCA1-203ENST00000526877 PTPN1P18031 435 aaKnown RBP13.39□□□□□ -0.27
SSSCA1-203ENST00000526877 NSFP46459 744 aaKnown RBP13.39□□□□□ -0.27
SSSCA1-203ENST00000526877 ARPP19P56211 112 aa13.39□□□□□ -0.27
SSSCA1-203ENST00000526877 NHLH1Q02575 133 aa13.39□□□□□ -0.27
SSSCA1-203ENST00000526877 YWHAHQ04917 246 aaPredicted RBP13.39□□□□□ -0.27
SSSCA1-203ENST00000526877 TCF15Q12870 199 aa13.39□□□□□ -0.27
SSSCA1-203ENST00000526877 ARHGAP17Q68EM7 881 aa13.39□□□□□ -0.27
SSSCA1-203ENST00000526877 OVOS1Q6IE37 1185 aa13.39□□□□□ -0.27
SSSCA1-203ENST00000526877 LCLAT1Q6UWP7 414 aa13.39□□□□□ -0.27
SSSCA1-203ENST00000526877 PASD1Q8IV76 773 aa13.39□□□□□ -0.27
SSSCA1-203ENST00000526877 B3GALNT2Q8NCR0 500 aa13.39□□□□□ -0.27
SSSCA1-203ENST00000526877 ST13P5Q8NFI4 369 aaPredicted RBP13.39□□□□□ -0.27
SSSCA1-203ENST00000526877 OLIG1Q8TAK6 271 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms