RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 TMC8Q8IU68 726 aa11.71□□□□□ -0.53
NEDD8-204ENST00000526430 OR5B17Q8NGF7 314 aa11.71□□□□□ -0.53
NEDD8-204ENST00000526430 GOLGA5Q8TBA6 731 aa11.71□□□□□ -0.53
NEDD8-204ENST00000526430 PARD3BQ8TEW8 1205 aa11.71□□□□□ -0.53
NEDD8-204ENST00000526430 ADAMTS14Q8WXS8 1223 aa11.71□□□□□ -0.53
NEDD8-204ENST00000526430 ACDQ96AP0 544 aa11.71□□□□□ -0.53
NEDD8-204ENST00000526430 ASB7Q9H672 318 aa11.71□□□□□ -0.53
NEDD8-204ENST00000526430 RPF1Q9H9Y2 349 aaKnown RBP11.71□□□□□ -0.53
NEDD8-204ENST00000526430 GOLGA2P5Q9HBQ8 144 aa11.71□□□□□ -0.53
NEDD8-204ENST00000526430 AFF4Q9UHB7 1163 aaKnown RBP11.71□□□□□ -0.53
NEDD8-204ENST00000526430 RWDD2AQ9UIY3 292 aa11.71□□□□□ -0.53
NEDD8-204ENST00000526430 CTNND2Q9UQB3 1225 aa11.71□□□□□ -0.53
NEDD8-204ENST00000526430 RAXQ9Y2V3 346 aa11.71□□□□□ -0.53
NEDD8-204ENST00000526430 MYO18AQ92614 2054 aaKnown RBP11.71□□□□□ -0.54
NEDD8-204ENST00000526430 A0A1W2PRU2 124 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 SYCE3A1L190 88 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 PSMA7O14818 248 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 PPEF2O14830 753 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 SYN3O14994 580 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 EXOC3O60645 756 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 KIF20AO95235 890 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 ENGP17813 658 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 DRD1P21728 446 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 ERCC5P28715 1186 aaPredicted RBP11.7□□□□□ -0.54
NEDD8-204ENST00000526430 PPP1R2P41236 205 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 DPP6P42658 865 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 CLCNKBP51801 687 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 GUCY2FP51841 1108 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 FKBP3Q00688 224 aaKnown RBP11.7□□□□□ -0.54
NEDD8-204ENST00000526430 LRRC63Q05C16 580 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 PAK1Q13153 545 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 SPATA1Q5VX52 437 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 SLC23A3Q6PIS1 610 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 APBB1IPQ7Z5R6 666 aaPredicted RBP11.7□□□□□ -0.54
NEDD8-204ENST00000526430 LSM14AQ8ND56 463 aaKnown RBP11.7□□□□□ -0.54
NEDD8-204ENST00000526430 C3orf58Q8NDZ4 430 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 BPIFB1Q8TDL5 484 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 CHFRQ96EP1 664 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 SRRTQ9BXP5 876 aaKnown RBP11.7□□□□□ -0.54
NEDD8-204ENST00000526430 KIAA1586Q9HCI6 787 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 TOPORSQ9NS56 1045 aaPredicted RBP11.7□□□□□ -0.54
NEDD8-204ENST00000526430 TUBGCP4Q9UGJ1 667 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 FBXL5Q9UKA1 691 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 RAI2Q9Y5P3 530 aa11.7□□□□□ -0.54
NEDD8-204ENST00000526430 MUC22E2RYF6 1773 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-204ENST00000526430 SCN1AP35498 2009 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 A0A087WV48 116 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 ANO9A1A5B4 782 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 LRRIQ3A6PVS8 624 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-204ENST00000526430 PIRO00625 290 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 TNFRSF10BO14763 440 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 CST3P01034 146 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-204ENST00000526430 EGFP01133 1207 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 C4BPAP04003 597 aaKnown RBP11.69□□□□□ -0.54
NEDD8-204ENST00000526430 PRB1P04280 392 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 LRPAP1P30533 357 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 HOXD12P35452 270 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 MAPK8P45983 427 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 BRCC3P46736 316 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 DGKEP52429 567 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 YARSP54577 528 aaKnown RBP11.69□□□□□ -0.54
NEDD8-204ENST00000526430 FAM193AP78312 1265 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 AMPD2Q01433 879 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 DMC1Q14565 340 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 CT47A1Q5JQC4 288 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-204ENST00000526430 STXBP5Q5T5C0 1151 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 LMBRD2Q68DH5 695 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-204ENST00000526430 FILIP1Q7Z7B0 1213 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 RASSF3Q86WH2 238 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 LURAP1LQ8IV03 231 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 CD302Q8IX05 232 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 ENOX1Q8TC92 643 aaKnown RBP11.69□□□□□ -0.54
NEDD8-204ENST00000526430 TMC2Q8TDI7 906 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 SLC39A7Q92504 469 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 PIGKQ92643 395 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 DNAJC25Q9H1X3 360 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 INTS13Q9NVM9 706 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 POLR3BQ9NW08 1133 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-204ENST00000526430 THG1LQ9NWX6 298 aaKnown RBP11.69□□□□□ -0.54
NEDD8-204ENST00000526430 RBAKQ9NYW8 714 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-204ENST00000526430 SIX4Q9UIU6 781 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 DERAQ9Y315 318 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 C2CD2Q9Y426 696 aa11.69□□□□□ -0.54
NEDD8-204ENST00000526430 I3L4J1 428 aa11.68□□□□□ -0.54
NEDD8-204ENST00000526430 ATXN7O15265 892 aaPredicted RBP11.68□□□□□ -0.54
NEDD8-204ENST00000526430 IL18RAPO95256 599 aa11.68□□□□□ -0.54
NEDD8-204ENST00000526430 PRAMEF12O95522 483 aa11.68□□□□□ -0.54
NEDD8-204ENST00000526430 FGF19O95750 216 aa11.68□□□□□ -0.54
NEDD8-204ENST00000526430 CYP3A5P20815 502 aa11.68□□□□□ -0.54
NEDD8-204ENST00000526430 BCKDHBP21953 392 aa11.68□□□□□ -0.54
NEDD8-204ENST00000526430 PSMC2P35998 433 aaKnown RBP11.68□□□□□ -0.54
NEDD8-204ENST00000526430 DHPSP49366 369 aaPredicted RBP11.68□□□□□ -0.54
NEDD8-204ENST00000526430 MARSP56192 900 aaKnown RBP11.68□□□□□ -0.54
NEDD8-204ENST00000526430 ARPP19P56211 112 aa11.68□□□□□ -0.54
NEDD8-204ENST00000526430 PPP2R3AQ06190 1150 aa11.68□□□□□ -0.54
NEDD8-204ENST00000526430 PPP3CAQ08209 521 aa11.68□□□□□ -0.54
NEDD8-204ENST00000526430 PLD1Q13393 1074 aa11.68□□□□□ -0.54
NEDD8-204ENST00000526430 IQCB1Q15051 598 aa11.68□□□□□ -0.54
NEDD8-204ENST00000526430 SPDYCQ5MJ68 293 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms