RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 PRMT8Q9NR22 394 aaPredicted RBP18.33■□□□□ 0.52
CCS-204ENST00000526066 CAPN11Q9UMQ6 739 aa18.33■□□□□ 0.52
CCS-204ENST00000526066 NOTCH4Q99466 2003 aa18.33■□□□□ 0.52
CCS-204ENST00000526066 FRYLO94915 3013 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 F8VZ95 297 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 LILRB5O75023 590 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 CILPO75339 1184 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 TPM1P09493 284 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 RAP1GAPP47736 663 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 YWHAHQ04917 246 aaPredicted RBP18.32■□□□□ 0.52
CCS-204ENST00000526066 MTAPQ13126 283 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 RAPGEF1Q13905 1077 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 MRPL58Q14197 206 aaKnown RBP18.32■□□□□ 0.52
CCS-204ENST00000526066 GRM2Q14416 872 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 ARHGAP44Q17R89 818 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 TANGO2Q6ICL3 276 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 OVOS1Q6IE37 1185 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 SLC8B1Q6J4K2 584 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 OSTM1Q86WC4 334 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 FMNL3Q8IVF7 1028 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 BAP1Q92560 729 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 ANP32BQ92688 251 aaKnown RBP18.32■□□□□ 0.52
CCS-204ENST00000526066 SPAG5Q96R06 1193 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 RTKNQ9BST9 563 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 PLA2G2FQ9BZM2 168 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 GPR88Q9GZN0 384 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 NUCKS1Q9H1E3 243 aaKnown RBP18.32■□□□□ 0.52
CCS-204ENST00000526066 SNX25Q9H3E2 840 aa18.32■□□□□ 0.52
CCS-204ENST00000526066 TIMM13Q9Y5L4 95 aaPredicted RBP18.32■□□□□ 0.52
CCS-204ENST00000526066 CD58P19256 250 aa18.31■□□□□ 0.52
CCS-204ENST00000526066 PCSK1P29120 753 aa18.31■□□□□ 0.52
CCS-204ENST00000526066 GNL1P36915 607 aaPredicted RBP18.31■□□□□ 0.52
CCS-204ENST00000526066 CCR3P51677 355 aa18.31■□□□□ 0.52
CCS-204ENST00000526066 ZNF132P52740 706 aa18.31■□□□□ 0.52
CCS-204ENST00000526066 ATXN1P54253 815 aaKnown RBP18.31■□□□□ 0.52
CCS-204ENST00000526066 ZBED6P86452 979 aa18.31■□□□□ 0.52
CCS-204ENST00000526066 FAM71AQ8IYT1 594 aa18.31■□□□□ 0.52
CCS-204ENST00000526066 THEM5Q8N1Q8 247 aa18.31■□□□□ 0.52
CCS-204ENST00000526066 ZNF397Q8NF99 534 aaPredicted RBP18.31■□□□□ 0.52
CCS-204ENST00000526066 OR6B3Q8NGW1 331 aa18.31■□□□□ 0.52
CCS-204ENST00000526066 NELL1Q92832 810 aa18.31■□□□□ 0.52
CCS-204ENST00000526066 ZNF512Q96ME7 567 aaPredicted RBP18.31■□□□□ 0.52
CCS-204ENST00000526066 CNTNAP3BQ96NU0 1288 aa18.31■□□□□ 0.52
CCS-204ENST00000526066 CNTNAP3Q9BZ76 1288 aa18.31■□□□□ 0.52
CCS-204ENST00000526066 DNAI2Q9GZS0 605 aa18.31■□□□□ 0.52
CCS-204ENST00000526066 IMPACTQ9P2X3 320 aa18.31■□□□□ 0.52
CCS-204ENST00000526066 LUC7L2Q9Y383 392 aaKnown RBP18.31■□□□□ 0.52
CCS-204ENST00000526066 PCDHB4Q9Y5E5 795 aa18.31■□□□□ 0.52
CCS-204ENST00000526066 INSL5Q9Y5Q6 135 aa18.31■□□□□ 0.52
CCS-204ENST00000526066 TPRP12270 2363 aaKnown RBP18.31■□□□□ 0.52
CCS-204ENST00000526066 FOXN3O00409 490 aaPredicted RBP18.3■□□□□ 0.52
CCS-204ENST00000526066 MICAL2O94851 1124 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 ATF2P15336 505 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 PSMC3P17980 439 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 CASP14P31944 242 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 SOX5P35711 763 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 STAT1P42224 750 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 NDST1P52848 882 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 FAM78AQ5JUQ0 283 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 TPGS2Q68CL5 300 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 LAIR1Q6GTX8 287 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 ZNF280DQ6N043 979 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 PRR23BQ6ZRT6 265 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 DRC7Q8IY82 874 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 TCEAL8Q8IYN2 117 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 LEMD2Q8NC56 503 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 WHAMMQ8TF30 809 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 DEPDC1BQ8WUY9 529 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 FAM3CQ92520 227 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 SYN2Q92777 582 aaPredicted RBP18.3■□□□□ 0.52
CCS-204ENST00000526066 ACBD6Q9BR61 282 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 NT5C1AQ9BXI3 368 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 CHRDQ9H2X0 955 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 DDX43Q9NXZ2 648 aaKnown RBP18.3■□□□□ 0.52
CCS-204ENST00000526066 EPG5Q9HCE0 2579 aa18.3■□□□□ 0.52
CCS-204ENST00000526066 TSC2P49815 1807 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 WDR27A2RRH5 827 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 OR6C75A6NL08 312 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 A8MXQ7 604 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 RNF225M0QZC1 329 aaPredicted RBP18.29■□□□□ 0.52
CCS-204ENST00000526066 ZNF263O14978 683 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 ABLIM3O94929 683 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 PAEPP09466 180 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 KRT5P13647 590 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 GDI1P31150 447 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 RAD23BP54727 409 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 ARID5BQ14865 1188 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 CTXN3Q4LDR2 81 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 TMEM270Q6UE05 265 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 YAF2Q8IY57 180 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 CRYBG2Q8N1P7 616 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 CELF5Q8N6W0 485 aaKnown RBP18.29■□□□□ 0.52
CCS-204ENST00000526066 RBBP8NLQ8NC74 664 aaPredicted RBP18.29■□□□□ 0.52
CCS-204ENST00000526066 SMARCD2Q92925 531 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 TNIP3Q96KP6 325 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 SLITRK6Q9H5Y7 841 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 ASAH2Q9NR71 780 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 CDH9Q9ULB4 789 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 NME7Q9Y5B8 376 aa18.29■□□□□ 0.52
CCS-204ENST00000526066 PIAS3Q9Y6X2 628 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms