RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SYCP1Q15431 976 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 ARHGAP29Q52LW3 1261 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 MIIPQ5JXC2 388 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 HECTD3Q5T447 861 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 STXBP5Q5T5C0 1151 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 TXNDC8Q6A555 127 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 PHLDB3Q6NSJ2 640 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 TRIM67Q6ZTA4 783 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 CLEC20AQ6ZU45 233 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 RSRC2Q7L4I2 434 aaKnown RBP5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 ARID3BQ8IVW6 561 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 CMTM8Q8IZV2 173 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 SLC44A3Q8N4M1 653 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 NEK11Q8NG66 645 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 LMO3Q8TAP4 145 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 BPIFB1Q8TDL5 484 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 CSGALNACT1Q8TDX6 532 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 WHAMMQ8TF30 809 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 RSAD2Q8WXG1 361 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 DNASE1L2Q92874 299 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 FGF14Q92915 247 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 IRF7Q92985 503 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 KAT5Q92993 513 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 EXOC4Q96A65 974 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 SHDQ96IW2 340 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 KREMEN1Q96MU8 473 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 NOX5Q96PH1 765 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 SPAG5Q96R06 1193 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 KCNK16Q96T55 309 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 SMOQ99835 787 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 TRIM62Q9BVG3 475 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 IL21Q9HBE4 155 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 CSNK1G1Q9HCP0 422 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 SLC2A4RGQ9NR83 387 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 TDP1Q9NUW8 608 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 OBP2AQ9NY56 170 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 LIMA1Q9UHB6 759 aaKnown RBP5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 DNAJC12Q9UKB3 198 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 TSPAN16Q9UKR8 245 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 SCML2Q9UQR0 700 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 DENND4AQ7Z401 1863 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZNF840PA6NDX5 716 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 PRR33A8MZF0 331 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 SLC9A3R1O14745 358 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 TLR5O60602 858 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 MOSPD3O75425 235 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 FBXO21O94952 628 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 CCDC172P0C7W6 258 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 MBL2P11226 248 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 UCHL3P15374 230 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZNF18P17022 549 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 GDI1P31150 447 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 VIPR2P41587 438 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 ACADSBP45954 432 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 PLA2G4AP47712 749 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 IFNAR2P48551 515 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 TKTL1P51854 596 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 KPNA1P52294 538 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZNF132P52740 706 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 USP46P62068 366 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 AMPD2Q01433 879 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 PDE4CQ08493 712 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 GRM2Q14416 872 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZNF268Q14587 947 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 PDGFRLQ15198 375 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 NFKBIBQ15653 356 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 CNGA2Q16280 664 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 MEA1Q16626 185 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 C10orf120Q5SQS8 335 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 TANGO2Q6ICL3 276 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 GJB7Q6PEY0 223 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 C1orf228Q6PIY5 440 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 LCLAT1Q6UWP7 414 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 VITQ6UXI7 678 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 PAQR9Q6ZVX9 377 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 CCDC186Q7Z3E2 898 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 CACNA2D4Q7Z3S7 1137 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 PIGZQ86VD9 579 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 MFSD6LQ8IWD5 586 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 DHX40Q8IX18 779 aaKnown RBP5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 SIX5Q8N196 739 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 CPA6Q8N4T0 437 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 UBR7Q8N806 425 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 ARL14EPQ8N8R7 260 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 MSANTD4Q8NCY6 345 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 SCAMP5Q8TAC9 235 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 UBA3Q8TBC4 463 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 IPO4Q8TEX9 1081 aaKnown RBP5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 RNF139Q8WU17 664 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 SHC3Q92529 594 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 SECISBP2LQ93073 1101 aaKnown RBP5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 PBXIP1Q96AQ6 731 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 MSANTD3Q96H12 275 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZSWIM3Q96MP5 696 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 SLC46A2Q9BY10 475 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 UBXN6Q9BZV1 441 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 TSPY26PQ9H489 355 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 EPHX3Q9H6B9 360 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 SYNCQ9H7C4 482 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 PLCB1Q9NQ66 1216 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms