RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 ADRA1DP25100 572 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 CDC25CP30307 473 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 GCKP35557 465 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 RAD23BP54727 409 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 ROR1Q01973 937 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 CNTN2Q02246 1040 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 SLC18A2Q05940 514 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 NOMO1Q15155 1222 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 SMTNL2Q2TAL5 461 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 TAF1BQ53T94 588 aaPredicted RBP8.68□□□□□ -1.02
CHD7-202ENST00000524602 ANKRD20A2Q5SQ80 823 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 ANKRD20A1Q5TYW2 823 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 ATF7IP2Q5U623 682 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 ANKRD20A3Q5VUR7 823 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 SCARA5Q6ZMJ2 495 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 CLNKQ7Z7G1 428 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 RNF149Q8NC42 400 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 STK32AQ8WU08 396 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 SLC44A1Q8WWI5 657 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 WDR83Q9BRX9 315 aaKnown RBP8.68□□□□□ -1.02
CHD7-202ENST00000524602 FZD8Q9H461 694 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 METTL5Q9NRN9 209 aaKnown RBP8.68□□□□□ -1.02
CHD7-202ENST00000524602 USP18Q9UMW8 372 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 POLIQ9UNA4 740 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 MTO1Q9Y2Z2 717 aaKnown RBP8.68□□□□□ -1.02
CHD7-202ENST00000524602 ZSWIM8A7E2V4 1837 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 CFAP69A5D8W1 941 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 BANF1O75531 89 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 TMEM63AO94886 807 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 GSTA2P09210 222 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 RBP3P10745 1247 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 MIPP30301 263 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 SLC26A2P50443 739 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 NEK3P51956 506 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 ZNF143P52747 638 aaPredicted RBP8.67□□□□□ -1.02
CHD7-202ENST00000524602 ZNF200P98182 395 aaPredicted RBP8.67□□□□□ -1.02
CHD7-202ENST00000524602 BBS9Q3SYG4 887 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 SCARA3Q6AZY7 606 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 C4orf22Q6V702 233 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 LBX2Q6XYB7 198 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 UNC45BQ8IWX7 931 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 TEX9Q8N6V9 391 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 FAM13CQ8NE31 585 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 SPATA18Q8TC71 538 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 THOC1Q96FV9 657 aaKnown RBP8.67□□□□□ -1.02
CHD7-202ENST00000524602 ZNF570Q96NI8 536 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 CPXM1Q96SM3 734 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 NFKBIZQ9BYH8 718 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 RPF1Q9H9Y2 349 aaKnown RBP8.67□□□□□ -1.02
CHD7-202ENST00000524602 NPHS2Q9NP85 383 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 CYTH4Q9UIA0 394 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 OTOFQ9HC10 1997 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 LPXNO60711 386 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 CCDC22O60826 627 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 ERBB2P04626 1255 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 SRGAP2CP0DJJ0 459 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 FGFR1P11362 822 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 MARK3P27448 753 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 BASP1P80723 227 aaKnown RBP8.67□□□□□ -1.02
CHD7-202ENST00000524602 PTPN11Q06124 597 aaPredicted RBP8.67□□□□□ -1.02
CHD7-202ENST00000524602 KCNJ11Q14654 390 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 EFTUD2Q15029 972 aaKnown RBP eCLIP8.67□□□□□ -1.02
CHD7-202ENST00000524602 KYAT1Q16773 422 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 CTC1Q2NKJ3 1217 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 KCNT1Q5JUK3 1230 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 FAM91A1Q658Y4 838 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 LONP2Q86WA8 852 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 TRIM42Q8IWZ5 723 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 KIAA0319LQ8IZA0 1049 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 FAM71DQ8N9W8 422 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.67□□□□□ -1.02
CHD7-202ENST00000524602 USP6NLQ92738 828 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 RTP4Q96DX8 246 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 TSSK1BQ9BXA7 367 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 IRAK4Q9NWZ3 460 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 PAK5Q9P286 719 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 SAE1Q9UBE0 346 aaPredicted RBP8.67□□□□□ -1.02
CHD7-202ENST00000524602 ZNF180Q9UJW8 692 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 TNFSF13BQ9Y275 285 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 TEX264Q9Y6I9 313 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 MGAMO43451 1857 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 ENO4A6NNW6 628 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 HGSO14964 777 aaPredicted RBP8.67□□□□□ -1.02
CHD7-202ENST00000524602 PEX11AO75192 247 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 CILPO75339 1184 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 INHBAP08476 426 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 VDRP11473 427 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 ETV4P43268 484 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 CCNHP51946 323 aaPredicted RBP8.67□□□□□ -1.02
CHD7-202ENST00000524602 PTK7Q13308 1070 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 PDK2Q15119 407 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 ILDR2Q71H61 639 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 MAP7D3Q8IWC1 876 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 MRRFQ96E11 262 aaKnown RBP8.67□□□□□ -1.02
CHD7-202ENST00000524602 TMEM176AQ96HP8 235 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 CNPY3Q9BT09 278 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 TRIM6Q9C030 488 aaPredicted RBP8.67□□□□□ -1.02
CHD7-202ENST00000524602 NXF1Q9UBU9 619 aaKnown RBP8.67□□□□□ -1.02
CHD7-202ENST00000524602 KIAA1257Q9ULG3 409 aa8.67□□□□□ -1.02
CHD7-202ENST00000524602 LRRC42Q9Y546 428 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms