RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 LZTS1Q9Y250 596 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 GIT1Q9Y2X7 761 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 CEP83Q9Y592 693 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 C2orf16Q68DN1 1984 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 INPPL1O15357 1258 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 CLASP2O75122 1294 aaKnown RBP7.48□□□□□ -1.21
VPS11-201ENST00000524454 ALDH2P05091 517 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 CALB1P05937 261 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 WEE2P0C1S8 567 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 VCANP13611 3396 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 KRT5P13647 590 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 EPCAMP16422 314 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 CYP3A5P20815 502 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 SP100P23497 879 aaPredicted RBP7.48□□□□□ -1.21
VPS11-201ENST00000524454 CTNNA2P26232 953 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 GNA15P30679 374 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 GBP1P32455 592 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 CTNNA1P35221 906 aaKnown RBP7.48□□□□□ -1.21
VPS11-201ENST00000524454 USP8P40818 1118 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 PNPLA4P41247 253 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 TNFSF9P41273 254 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 ASPAP45381 313 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 YARSP54577 528 aaKnown RBP7.48□□□□□ -1.21
VPS11-201ENST00000524454 WNT7BP56706 349 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 NOMO3P69849 1222 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 RBP5P82980 135 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 DSC1Q08554 894 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 GRIK3Q13003 919 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 NNTQ13423 1086 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 TMEM132DQ14C87 1099 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 DUSP6Q16828 381 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 XKR4Q5GH76 650 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 ZNF667Q5HYK9 610 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 ZBTB41Q5SVQ8 909 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 CC2D1AQ6P1N0 951 aaPredicted RBP7.48□□□□□ -1.21
VPS11-201ENST00000524454 MON1BQ7L1V2 547 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 DDX53Q86TM3 631 aaKnown RBP7.48□□□□□ -1.21
VPS11-201ENST00000524454 C12orf76Q8N812 135 aaPredicted RBP7.48□□□□□ -1.21
VPS11-201ENST00000524454 TMEM35BQ8NCS4 154 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 LRRN4CLQ8ND94 238 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 CXorf38Q8TB03 319 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 SLC20A1Q8WUM9 679 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 CD101Q93033 1021 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 ACAP3Q96P50 834 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 TMEM175Q9BSA9 504 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 PARD6BQ9BYG5 372 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 SLC6A16Q9GZN6 736 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 APOBEC3GQ9HC16 384 aaKnown RBP7.48□□□□□ -1.21
VPS11-201ENST00000524454 UBN1Q9NPG3 1134 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 CISHQ9NSE2 258 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 FAM53CQ9NYF3 392 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 CNTN3Q9P232 1028 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 STIM2Q9P246 746 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 CTTNBP2NLQ9P2B4 639 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 KANSL3Q9P2N6 904 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 CD207Q9UJ71 328 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 NUB1Q9Y5A7 615 aa7.48□□□□□ -1.21
VPS11-201ENST00000524454 GOLGA6L10A0A0M3HER8 536 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 RNF223E7ERA6 249 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 I3L4J1 428 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 TNFRSF10AO00220 468 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 KCNK3O14649 394 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 MBTPS2O43462 519 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 FTCDO95954 541 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 THP07101 528 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 MMEP08473 750 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 SPATA31D3P0C874 917 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 CXCL8P10145 99 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 CTSAP10619 480 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 KCNE1P15382 129 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 RPL17P18621 184 aaKnown RBP7.47□□□□□ -1.21
VPS11-201ENST00000524454 MMP8P22894 467 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 POLR2BP30876 1174 aaKnown RBP7.47□□□□□ -1.21
VPS11-201ENST00000524454 MYL6P60660 151 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 TFAMQ00059 246 aaKnown RBP7.47□□□□□ -1.21
VPS11-201ENST00000524454 SOX4Q06945 474 aaPredicted RBP7.47□□□□□ -1.21
VPS11-201ENST00000524454 MYO1EQ12965 1108 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 ZBTB6Q15916 424 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 TUSC1Q2TAM9 212 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 SLC10A6Q3KNW5 377 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 LRRC38Q5VT99 294 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 PLEKHA7Q6IQ23 1121 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 C8orf74Q6P047 294 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 FUT10Q6P4F1 479 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 EMBQ6PCB8 327 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 TMEM270Q6UE05 265 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 PRSS55Q6UWB4 352 aaPredicted RBP7.47□□□□□ -1.21
VPS11-201ENST00000524454 ALKAL1Q6UXT8 129 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 SPATA31D4Q6ZUB0 917 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 RETREG3Q86VR2 466 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 PALB2Q86YC2 1186 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 MCOLN2Q8IZK6 566 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 NIPA2Q8N8Q9 360 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 MRPL43Q8N983 215 aaKnown RBP7.47□□□□□ -1.21
VPS11-201ENST00000524454 C1orf127Q8N9H9 656 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 NOA1Q8NC60 698 aaKnown RBP7.47□□□□□ -1.21
VPS11-201ENST00000524454 ZNF564Q8TBZ8 553 aaPredicted RBP7.47□□□□□ -1.21
VPS11-201ENST00000524454 FNIP1Q8TF40 1166 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 COG1Q8WTW3 980 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 MAIP1Q8WWC4 291 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms