RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 FCHO1O14526 889 aa6.81□□□□□ -1.32
SKP1-213ENST00000524288 SCAF4O95104 1147 aaKnown RBP6.81□□□□□ -1.32
SKP1-213ENST00000524288 HGFP14210 728 aa6.81□□□□□ -1.32
SKP1-213ENST00000524288 KCNA2P16389 499 aa6.81□□□□□ -1.32
SKP1-213ENST00000524288 ITGALP20701 1170 aa6.81□□□□□ -1.32
SKP1-213ENST00000524288 SATB1Q01826 763 aa6.81□□□□□ -1.32
SKP1-213ENST00000524288 PPFIA1Q13136 1202 aa6.81□□□□□ -1.32
SKP1-213ENST00000524288 ZNF750Q32MQ0 723 aa6.81□□□□□ -1.32
SKP1-213ENST00000524288 FAXCQ5TGI0 409 aa6.81□□□□□ -1.32
SKP1-213ENST00000524288 RGS7BPQ6MZT1 257 aaPredicted RBP6.81□□□□□ -1.32
SKP1-213ENST00000524288 MAPKAPK5Q8IW41 473 aa6.81□□□□□ -1.32
SKP1-213ENST00000524288 OR1N1Q8NGS0 311 aa6.81□□□□□ -1.32
SKP1-213ENST00000524288 RUBCNQ92622 972 aa6.81□□□□□ -1.32
SKP1-213ENST00000524288 RILPL2Q969X0 211 aa6.81□□□□□ -1.32
SKP1-213ENST00000524288 FAM167BQ9BTA0 163 aa6.81□□□□□ -1.32
SKP1-213ENST00000524288 MLXIPQ9HAP2 919 aa6.81□□□□□ -1.32
SKP1-213ENST00000524288 PRDM16Q9HAZ2 1276 aa6.81□□□□□ -1.32
SKP1-213ENST00000524288 DMRT1Q9Y5R6 373 aa6.81□□□□□ -1.32
SKP1-213ENST00000524288 FOXN1O15353 648 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 KCNQ3O43525 872 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 FAM20BO75063 409 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 CD53P19397 219 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 KCNA3P22001 575 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 ADORA2AP29274 412 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 NTSR1P30989 418 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 NDUFV1P49821 464 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 MAPKAPK3Q16644 382 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 GEN1Q17RS7 908 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 VPS53Q5VIR6 699 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 Q6ZPA2 131 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 GDF7Q7Z4P5 450 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 FAM9AQ8IZU1 332 aaPredicted RBP6.8□□□□□ -1.32
SKP1-213ENST00000524288 GALNT15Q8N3T1 639 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 CPT1CQ8TCG5 803 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 PNISRQ8TF01 805 aaKnown RBP6.8□□□□□ -1.32
SKP1-213ENST00000524288 RNF31Q96EP0 1072 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 UBA5Q9GZZ9 404 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 SLC25A32Q9H2D1 315 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 DHX36Q9H2U1 1008 aaKnown RBP6.8□□□□□ -1.32
SKP1-213ENST00000524288 ZNF768Q9H5H4 540 aaKnown RBP6.8□□□□□ -1.32
SKP1-213ENST00000524288 GBA2Q9HCG7 927 aaPredicted RBP6.8□□□□□ -1.32
SKP1-213ENST00000524288 VPS45Q9NRW7 570 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 RNF181Q9P0P0 153 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 SERTAD3Q9UJW9 196 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 NDRG4Q9ULP0 352 aaKnown RBP6.8□□□□□ -1.32
SKP1-213ENST00000524288 HS3ST4Q9Y661 456 aa6.8□□□□□ -1.32
SKP1-213ENST00000524288 AQP7P3A6NL99 342 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 F5H697 171 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 EIF3FO00303 357 aaPredicted RBP6.79□□□□□ -1.32
SKP1-213ENST00000524288 COQ9O75208 318 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 PYGLP06737 847 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 ITGA5P08648 1049 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 SRGAP2BP0DMP2 458 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 KRT4P19013 534 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 MST1P26927 711 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 LRPAP1P30533 357 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 DGKEP52429 567 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 FAM189BP81408 668 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 SLC4A8Q2Y0W8 1093 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 LY6G5CQ5SRR4 150 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 RBM20Q5T481 1227 aaKnown RBP6.79□□□□□ -1.32
SKP1-213ENST00000524288 MANEALQ5VSG8 457 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 LVRNQ6Q4G3 990 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 KLHL17Q6TDP4 642 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 LRRC55Q6ZSA7 311 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 GATAD2AQ86YP4 633 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 SPARTQ8N0X7 666 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 Q8NA96 180 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 STT3BQ8TCJ2 826 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 ZBTB45Q96K62 511 aaPredicted RBP6.79□□□□□ -1.32
SKP1-213ENST00000524288 KATNAL1Q9BW62 490 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 MAF1Q9H063 256 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 CAPN11Q9UMQ6 739 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 CHST2Q9Y4C5 530 aa6.79□□□□□ -1.32
SKP1-213ENST00000524288 HMX3A6NHT5 357 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 AHRRA9YTQ3 701 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 PCDH17O14917 1159 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 HSD3B1P14060 373 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 NPPBP16860 134 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 KLRK1P26718 216 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 NPTX2P47972 431 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 ANXA11P50995 505 aaKnown RBP6.78□□□□□ -1.32
SKP1-213ENST00000524288 SP2Q02086 613 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 FPGSQ05932 587 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 FOXO1Q12778 655 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 GPS1Q13098 491 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 SLC5A9Q2M3M2 681 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 ARL6IP4Q66PJ3 421 aaKnown RBP6.78□□□□□ -1.32
SKP1-213ENST00000524288 B3GNTL1Q67FW5 361 aaPredicted RBP6.78□□□□□ -1.32
SKP1-213ENST00000524288 LAIR1Q6GTX8 287 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 CCDC70Q6NSX1 233 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 MRNIPQ6NTE8 343 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 USP17L6PQ6QN14 398 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 MMS22LQ6ZRQ5 1243 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 CLNKQ7Z7G1 428 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 ANKRD18AQ8IVF6 992 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 ADGRG5Q8IZF4 528 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 CLASRPQ8N2M8 674 aaKnown RBP6.78□□□□□ -1.32
SKP1-213ENST00000524288 ZNF384Q8TF68 577 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 GRAMD1AQ96CP6 724 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms