RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	FAM107B	Q9H098	131 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	CDHR5	Q9HBB8	845 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	PCDH9	Q9HC56	1237 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	CYTH4	Q9UIA0	394 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	USP18	Q9UMW8	372 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	SMIM28	A0A1B0GU29	152 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	DPYSL4	O14531	572 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	RIPK2	O43353	540 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	CST8	O60676	142 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	ACSL3	O95573	720 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	TRUB2	O95900	331 aa	Known RBP	11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	AGT	P01019	485 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	ITGAV	P06756	1048 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	CTSH	P09668	335 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	CYBA	P13498	195 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	ELN	P15502	786 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	IBSP	P21815	317 aa	Predicted RBP	11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	KDELR1	P24390	212 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	MIP	P30301	263 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	FLT3LG	P49771	235 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	RAB27A	P51159	221 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	GJA9	P57773	515 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	EIF3E	P60228	445 aa	Known RBP	11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	MAGOH	P61326	146 aa	Known RBP	11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	ZNF200	P98182	395 aa	Predicted RBP	11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	SLC6A3	Q01959	620 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	ROR1	Q01973	937 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	PDK2	Q15119	407 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	MICALCL	Q6ZW33	695 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	BBS12	Q6ZW61	710 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	CENPU	Q71F23	418 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	ZDHHC14	Q8IZN3	488 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	ALLC	Q8N6M5	410 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	TOP6BL	Q8N6T0	577 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	UHMK1	Q8TAS1	419 aa	Known RBP	11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	RXFP2	Q8WXD0	754 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	RAPGEF5	Q92565	580 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	CFAP57	Q96MR6	1250 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	ZMAT2	Q96NC0	199 aa	Known RBP	11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	TXLNGY	Q9BZA5	131 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	CYLD	Q9NQC7	956 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	XPNPEP3	Q9NQH7	507 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	TJP2	Q9UDY2	1190 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	DNPEP	Q9ULA0	475 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	TPX2	Q9ULW0	747 aa	Known RBP	11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	SHOC2	Q9UQ13	582 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	DRG1	Q9Y295	367 aa	Known RBP	11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	SHROOM3	Q8TF72	1996 aa		11.27	□□□□□ -0.61
SPIDR-222	ENST00000524006	ARHGEF37	A1IGU5	675 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006		H7C0C1	242 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	SMAP	O00193	183 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	NDUFAB1	O14561	156 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	DNALI1	O14645	258 aa	Predicted RBP	11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	APOL1	O14791	398 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	PPEF2	O14830	753 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	GPR182	O15218	404 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	GRAP2	O75791	330 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	INHA	P05111	366 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	PDGFRB	P09619	1106 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	LCP1	P13796	627 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	CCDC130	P13994	396 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	TCF4	P15884	667 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	MDH1	P40925	334 aa	Known RBP	11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	ATP5O	P48047	213 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	ATP11A	P98196	1134 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	OTUD4	Q01804	1114 aa	Known RBP	11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	SLC29A2	Q14542	456 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	MORF4L2	Q15014	288 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	NBPF20	Q3BBV1	942 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	ATP13A4	Q4VNC1	1196 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	TTC19	Q6DKK2	380 aa	Predicted RBP	11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	DARS2	Q6PI48	645 aa	Known RBP	11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	POTEH	Q6S545	545 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	CXCL17	Q6UXB2	119 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	DSTYK	Q6XUX3	929 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	FAM228A	Q86W67	206 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	METTL23	Q86XA0	190 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	SIX6OS1	Q8N1H7	587 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	TMEM130	Q8N3G9	435 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	ZCCHC9	Q8N567	271 aa	Known RBP	11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	ACTL9	Q8TC94	416 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	STK32A	Q8WU08	396 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	FAM172A	Q8WUF8	416 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	TEKT4	Q8WW24	435 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	TMEM40	Q8WWA1	233 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	P3H4	Q92791	437 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	NKD2	Q969F2	451 aa	Predicted RBP	11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	TBCB	Q99426	244 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	FERMT1	Q9BQL6	677 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	HERPUD2	Q9BSE4	406 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	UPF3A	Q9H1J1	476 aa	Known RBP	11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	SAYSD1	Q9NPB0	183 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	CHST12	Q9NRB3	414 aa		11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	DNAJC17	Q9NVM6	304 aa	Known RBP	11.26	□□□□□ -0.61
SPIDR-222	ENST00000524006	GDAP2	Q9NXN4	497 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms