RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 TOP6BLQ8N6T0 577 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 ZSWIM2Q8NEG5 633 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 ZNF507Q8TCN5 953 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 RHBDD1Q8TEB9 315 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 RSPRY1Q96DX4 576 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 TRMT2BQ96GJ1 504 aaKnown RBP6.44□□□□□ -1.38
FAM49B-228ENST00000523993 MYRFLQ96LU7 910 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 CEP295NLQ96MC4 621 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 LRRC3BQ96PB8 259 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 PGLYRP2Q96PD5 576 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 C7orf25Q9BPX7 421 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 PYM1Q9BRP8 204 aaKnown RBP6.44□□□□□ -1.38
FAM49B-228ENST00000523993 CBWD1Q9BRT8 395 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 FAM213AQ9BRX8 229 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 FGFBP2Q9BYJ0 223 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 TRIM9Q9C026 710 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 IKZF4Q9H2S9 585 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 ZHX3Q9H4I2 956 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 TASP1Q9H6P5 420 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 C8orf33Q9H7E9 229 aaPredicted RBP6.44□□□□□ -1.38
FAM49B-228ENST00000523993 BRD9Q9H8M2 597 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 MAGEF1Q9HAY2 307 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 KIAA1586Q9HCI6 787 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 PANK4Q9NVE7 773 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 SIX4Q9UIU6 781 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 PLXND1Q9Y4D7 1925 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 UBE4BO95155 1302 aa6.44□□□□□ -1.38
FAM49B-228ENST00000523993 NUP205Q92621 2012 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 ZNF263O14978 683 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 LAMTOR5O43504 91 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 CUTAO60888 179 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 F11P03951 625 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 ITGB3P05106 788 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 CHRNB1P11230 501 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 GJA1P17302 382 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 CD72P21854 359 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 GABRR2P28476 465 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 HOXA6P31267 233 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 GGCXP38435 758 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 VIPR2P41587 438 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 PTGIRP43119 386 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 LHX1P48742 406 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 IDH3AP50213 366 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 AMPD3Q01432 767 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 CEBPZQ03701 1054 aaKnown RBP6.43□□□□□ -1.38
FAM49B-228ENST00000523993 MTAPQ13126 283 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 GRM2Q14416 872 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 ZNF268Q14587 947 aaPredicted RBP6.43□□□□□ -1.38
FAM49B-228ENST00000523993 VEPH1Q14D04 833 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 TRIP4Q15650 581 aaPredicted RBP6.43□□□□□ -1.38
FAM49B-228ENST00000523993 BMT2Q1RMZ1 405 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 ARHGAP29Q52LW3 1261 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 ARHGAP15Q53QZ3 475 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 FAM171BQ6P995 826 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 SHC4Q6S5L8 630 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 NXPE4Q6UWF7 544 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 STXBP4Q6ZWJ1 553 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 ZNF438Q7Z4V0 828 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 RALGPS2Q86X27 583 aaPredicted RBP6.43□□□□□ -1.38
FAM49B-228ENST00000523993 C12orf56Q8IXR9 622 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 DCP1BQ8IZD4 617 aaKnown RBP6.43□□□□□ -1.38
FAM49B-228ENST00000523993 SYNPOQ8N3V7 929 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 PDCL2Q8N4E4 241 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 KIAA1958Q8N8K9 716 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 IQUBQ8NA54 791 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 FAM3CQ92520 227 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 RUBCNQ92622 972 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 FUBP3Q96I24 572 aaKnown RBP eCLIP6.43□□□□□ -1.38
FAM49B-228ENST00000523993 HSH2DQ96JZ2 352 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 SPACA7Q96KW9 195 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 ZNF396Q96N95 335 aaPredicted RBP6.43□□□□□ -1.38
FAM49B-228ENST00000523993 FAM83CQ9BQN1 747 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 EPC1Q9H2F5 836 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 INTS13Q9NVM9 706 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 SPATA6Q9NWH7 488 aaPredicted RBP6.43□□□□□ -1.38
FAM49B-228ENST00000523993 ZSCAN32Q9NX65 697 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 RBAKQ9NYW8 714 aaPredicted RBP6.43□□□□□ -1.38
FAM49B-228ENST00000523993 CGNQ9P2M7 1197 aaKnown RBP6.43□□□□□ -1.38
FAM49B-228ENST00000523993 L1RE1Q9UN81 338 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 PCDHB5Q9Y5E4 795 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 PIAS3Q9Y6X2 628 aa6.43□□□□□ -1.38
FAM49B-228ENST00000523993 PVALEFA0A1B0GWK0 134 aa6.42□□□□□ -1.38
FAM49B-228ENST00000523993 ZNF233A6NK53 670 aa6.42□□□□□ -1.38
FAM49B-228ENST00000523993 TGFB1I1O43294 461 aa6.42□□□□□ -1.38
FAM49B-228ENST00000523993 KINO60870 393 aaKnown RBP6.42□□□□□ -1.38
FAM49B-228ENST00000523993 HUS1O60921 280 aa6.42□□□□□ -1.38
FAM49B-228ENST00000523993 PHACTR2O75167 634 aa6.42□□□□□ -1.38
FAM49B-228ENST00000523993 NOL4O94818 638 aa6.42□□□□□ -1.38
FAM49B-228ENST00000523993 PRPF6O94906 941 aaKnown RBP6.42□□□□□ -1.38
FAM49B-228ENST00000523993 CSH1P0DML2 217 aa6.42□□□□□ -1.38
FAM49B-228ENST00000523993 CSH2P0DML3 217 aa6.42□□□□□ -1.38
FAM49B-228ENST00000523993 IDEP14735 1019 aa6.42□□□□□ -1.38
FAM49B-228ENST00000523993 PFKLP17858 780 aa6.42□□□□□ -1.38
FAM49B-228ENST00000523993 PCSK1P29120 753 aa6.42□□□□□ -1.38
FAM49B-228ENST00000523993 POLR2BP30876 1174 aaKnown RBP6.42□□□□□ -1.38
FAM49B-228ENST00000523993 MAGEA11P43364 429 aa6.42□□□□□ -1.38
FAM49B-228ENST00000523993 CCR3P51677 355 aa6.42□□□□□ -1.38
FAM49B-228ENST00000523993 NRLP54845 237 aa6.42□□□□□ -1.38
FAM49B-228ENST00000523993 NLRP12P59046 1061 aa6.42□□□□□ -1.38
FAM49B-228ENST00000523993 RBP5P82980 135 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms