RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 HNRNPFP52597 415 aaKnown RBP8.73□□□□□ -1.01
CSMD1-213ENST00000523488 ARHGAP44Q17R89 818 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 MDH1BQ5I0G3 518 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 SLX4IPQ5VYV7 408 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 SPOPLQ6IQ16 392 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 CCDC89Q8N998 374 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 NAT8LQ8N9F0 302 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 PNMA1Q8ND90 353 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 FEM1CQ96JP0 617 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 NMUR2Q9GZQ4 415 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 PLAC1Q9HBJ0 212 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 C6orf50Q9HD87 102 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 CHST7Q9NS84 486 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 SEL1LQ9UBV2 794 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 TIMM22Q9Y584 194 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 E5RJQ4 531 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 VDRP11473 427 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 PLS3P13797 630 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 GAP43P17677 238 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 CACNB1Q02641 598 aaPredicted RBP8.73□□□□□ -1.01
CSMD1-213ENST00000523488 KRT81Q14533 505 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 DRAP1Q14919 205 aaPredicted RBP8.73□□□□□ -1.01
CSMD1-213ENST00000523488 C16orf72Q14CZ0 275 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 EFHC1Q5JVL4 640 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 C8orf82Q6P1X6 216 aaPredicted RBP8.73□□□□□ -1.01
CSMD1-213ENST00000523488 ANO5Q75V66 913 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 TOP1MTQ969P6 601 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 EGLN2Q96KS0 407 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 UBXN10Q96LJ8 280 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 SORT1Q99523 831 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 NACA2Q9H009 215 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 INTS2Q9H0H0 1204 aaKnown RBP8.73□□□□□ -1.01
CSMD1-213ENST00000523488 MRPL46Q9H2W6 279 aaKnown RBP8.73□□□□□ -1.01
CSMD1-213ENST00000523488 MAGEE1Q9HCI5 957 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 RNF11Q9Y3C5 154 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 DICER1Q9UPY3 1922 aaKnown RBP8.73□□□□□ -1.01
CSMD1-213ENST00000523488 NMT2O60551 498 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 PLA2G4BP0C869 781 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 DLATP10515 647 aaKnown RBP8.72□□□□□ -1.01
CSMD1-213ENST00000523488 JUNBP17275 347 aaPredicted RBP8.72□□□□□ -1.01
CSMD1-213ENST00000523488 RPA1P27694 616 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 PPARGP37231 505 aaPredicted RBP8.72□□□□□ -1.01
CSMD1-213ENST00000523488 NAA20P61599 178 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 CLDN10P78369 228 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 ADGRE1Q14246 886 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 ZFYVE27Q5T4F4 411 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 GJB7Q6PEY0 223 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 C16orf86Q6ZW13 317 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 TBC1D15Q8TC07 691 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 GIPC3Q8TF64 312 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 STARD8Q92502 1023 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 C8orf37Q96NL8 207 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 MRPL1Q9BYD6 325 aaKnown RBP8.72□□□□□ -1.01
CSMD1-213ENST00000523488 SMYD3Q9H7B4 428 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 ZNF287Q9HBT7 754 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 FBXO6Q9NRD1 293 aaPredicted RBP8.72□□□□□ -1.01
CSMD1-213ENST00000523488 TMEM9Q9P0T7 183 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 ARMCX1Q9P291 453 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 RSL24D1Q9UHA3 163 aaKnown RBP8.72□□□□□ -1.01
CSMD1-213ENST00000523488 VAV3Q9UKW4 847 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 SOX13Q9UN79 622 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 STX8Q9UNK0 236 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 DOLKQ9UPQ8 538 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 PCDHB13Q9Y5F0 798 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 DCAF8L1A6NGE4 600 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 C3orf70A6NLC5 250 aaPredicted RBP8.72□□□□□ -1.01
CSMD1-213ENST00000523488 H3BNH8 94 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 LIASO43766 372 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 SLITRK3O94933 977 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 PARNO95453 639 aaKnown RBP8.72□□□□□ -1.01
CSMD1-213ENST00000523488 C7P10643 843 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 MAGEA3P43357 314 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 ZFP1Q6P2D0 407 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 CLEC4GQ6UXB4 293 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 DACH2Q96NX9 599 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 TSSK1BQ9BXA7 367 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 ANKRD60Q9BZ19 345 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 VAT1LQ9HCJ6 419 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 LZTS1Q9Y250 596 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 ADAMTSL1Q8N6G6 1762 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 DYTNA2CJ06 578 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 CRTAMO95727 393 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 CPNE6O95741 557 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 THRAP10827 490 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 NFKBIAP25963 317 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 EPHB1P54762 984 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 NUP107P57740 925 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 EVX2Q03828 476 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 ZBTB17Q13105 803 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 EFTUD2Q15029 972 aaKnown RBP eCLIP8.72□□□□□ -1.01
CSMD1-213ENST00000523488 OXA1LQ15070 435 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 THOC7Q6I9Y2 204 aaKnown RBP8.72□□□□□ -1.01
CSMD1-213ENST00000523488 SLC2A7Q6PXP3 512 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 MIER3Q7Z3K6 550 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 TRIML2Q8N7C3 387 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 NIPA2Q8N8Q9 360 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 EXD1Q8NHP7 514 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 TRUB1Q8WWH5 349 aaKnown RBP8.72□□□□□ -1.01
CSMD1-213ENST00000523488 BTN2A3PQ96KV6 586 aa8.72□□□□□ -1.01
CSMD1-213ENST00000523488 ZNF778Q96MU6 729 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms