RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 FAM90A14PP0C7W9 464 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 ENDOUP21128 410 aaKnown RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 ECHS1P30084 290 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 BUD31P41223 144 aaPredicted RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 NRG3P56975 720 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 YBEYP58557 167 aaPredicted RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 ACTN3Q08043 901 aaPredicted RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 MYO1EQ12965 1108 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 PTP4A2Q12974 167 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 NFIL3Q16649 462 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 MST1LQ2TV78 715 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 ANKDD1AQ495B1 522 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 TRIM60Q495X7 471 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 ZNF805Q5CZA5 627 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 PLEKHS1Q5SXH7 462 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 ERMARDQ5T6L9 678 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 C22orf34Q6ZV56 151 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 FAM214BQ7L5A3 538 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 ALYREFQ86V81 257 aaKnown RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 IRF2BP1Q8IU81 584 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 SCN4BQ8IWT1 228 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 KIAA2013Q8IYS2 634 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 TBC1D21Q8IYX1 336 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 CNTROBQ8N137 903 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 MFSD4AQ8N468 514 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 SLC15A4Q8N697 577 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 AOPEPQ8N6M6 819 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 DNAJC5GQ8N7S2 189 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 FRMD1Q8N878 549 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 TDRD5Q8NAT2 981 aaKnown RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 IPMKQ8NFU5 416 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 GABPB2Q8TAK5 448 aaPredicted RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 GSDMBQ8TAX9 411 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 DENND1AQ8TEH3 1009 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 SPSB4Q96A44 273 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 CFAP53Q96M91 514 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 AK8Q96MA6 479 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 RUNDC3BQ96NL0 473 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 DACH2Q96NX9 599 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 MOGAT1Q96PD6 335 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 CITED2Q99967 270 aaPredicted RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 APOL6Q9BWW8 343 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 MAK16Q9BXY0 300 aaKnown RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 SLAMF7Q9NQ25 335 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 INTS10Q9NVR2 710 aaKnown RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 MRPL15Q9P015 296 aaKnown RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 TBC1D30Q9Y2I9 924 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 KDM3AQ9Y4C1 1321 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 ATAD2BQ9ULI0 1458 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 A0A0A6YYK5 440 aaPredicted RBP4.34□□□□□ -1.71
SKP1-209ENST00000522552 TNPO2O14787 897 aaKnown RBP4.34□□□□□ -1.71
SKP1-209ENST00000522552 TP73O15350 636 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 CCNDBP1O95273 360 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 GGPS1O95749 300 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 EEF2P13639 858 aaKnown RBP4.34□□□□□ -1.71
SKP1-209ENST00000522552 ELNP15502 786 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 NFKBIAP25963 317 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 ACVR2AP27037 513 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 MAPK3P27361 379 aaPredicted RBP4.34□□□□□ -1.71
SKP1-209ENST00000522552 SERPINA4P29622 427 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 GP5P40197 560 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 SLC11A2P49281 568 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 HMGN5P82970 282 aaKnown RBP4.34□□□□□ -1.71
SKP1-209ENST00000522552 PDCLQ13371 301 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 CAMK1Q14012 370 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 NFIXQ14938 502 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 GALNTL6Q49A17 601 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 FAXCQ5TGI0 409 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 HLA-DQA1Q5Y7H0 255 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 MRNIPQ6NTE8 343 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 RINT1Q6NUQ1 792 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 TRAT1Q6PIZ9 186 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 ZDHHC24Q6UX98 284 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 SEZ6L2Q6UXD5 910 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 ABHD15Q6UXT9 468 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 RNF111Q6ZNA4 994 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 METTL23Q86XA0 190 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 RASGRP3Q8IV61 690 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 RHOT2Q8IXI1 618 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 AGGF1Q8N302 714 aaeCLIP4.34□□□□□ -1.71
SKP1-209ENST00000522552 GIMAP7Q8NHV1 300 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 PHOSPHO1Q8TCT1 267 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 CPT1BQ92523 772 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 PERPQ96FX8 193 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 TOE1Q96GM8 510 aaKnown RBP4.34□□□□□ -1.71
SKP1-209ENST00000522552 GBP5Q96PP8 586 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 ABHD1Q96SE0 405 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 DBNDD2Q9BQY9 259 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 SOX7Q9BT81 388 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 THUMPD3Q9BV44 507 aaKnown RBP4.34□□□□□ -1.71
SKP1-209ENST00000522552 ZCWPW1Q9H0M4 648 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 RANBP17Q9H2T7 1088 aaKnown RBP4.34□□□□□ -1.71
SKP1-209ENST00000522552 LDAHQ9H6V9 325 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 LIN28AQ9H9Z2 209 aaKnown RBP4.34□□□□□ -1.71
SKP1-209ENST00000522552 SLC35C2Q9NQQ7 365 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 SNX15Q9NRS6 342 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 MCM9Q9NXL9 1143 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 UBA2Q9UBT2 640 aaPredicted RBP4.34□□□□□ -1.71
SKP1-209ENST00000522552 CNOT7Q9UIV1 285 aaKnown RBP4.34□□□□□ -1.71
SKP1-209ENST00000522552 USP21Q9UK80 565 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms