RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ZMIZ2Q8NF64 920 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 SLC35G2Q8TBE7 412 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 ZNF564Q8TBZ8 553 aaPredicted RBP13.76□□□□□ -0.21
CPNE3-205ENST00000522240 MCRS1Q96EZ8 462 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 CEP295NLQ96MC4 621 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 C16orf45Q96MC5 204 aaPredicted RBP13.76□□□□□ -0.21
CPNE3-205ENST00000522240 ALS2CR12Q96Q35 445 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 TGS1Q96RS0 853 aaKnown RBP13.76□□□□□ -0.21
CPNE3-205ENST00000522240 NUP85Q9BW27 656 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 RXFP1Q9HBX9 757 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 ST7Q9NRC1 585 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 PARVAQ9NVD7 372 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 ABI2Q9NYB9 513 aaPredicted RBP13.76□□□□□ -0.21
CPNE3-205ENST00000522240 CTTNBP2NLQ9P2B4 639 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 AFF4Q9UHB7 1163 aaKnown RBP13.76□□□□□ -0.21
CPNE3-205ENST00000522240 SALL4Q9UJQ4 1053 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 MAFFQ9ULX9 164 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 IRAK3Q9Y616 596 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 DUSP10Q9Y6W6 482 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 MYH10P35580 1976 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 WDR27A2RRH5 827 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 GRXCR2A6NFK2 248 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 GRXCR1A8MXD5 290 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 HHLA1C9JL84 531 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 LILRB3O75022 631 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 BEST1O76090 585 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 FBXO21O94952 628 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 ARHGEF15O94989 841 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 RGS7P49802 495 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 NDUFV1P49821 464 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 CACNA2D1P54289 1103 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 ERVK-21P61565 698 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 ETF1P62495 437 aaKnown RBP13.75□□□□□ -0.21
CPNE3-205ENST00000522240 RAB33AQ14088 237 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 RAB41Q5JT25 222 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 CYP4A22Q5TCH4 519 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 C11orf63Q6NUN7 778 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 SCML4Q8N228 414 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 TPCN2Q8NHX9 752 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 C8orf48Q96LL4 319 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 CLSTN3Q9BQT9 956 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 C17orf80Q9BSJ5 609 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 LRRC4Q9HBW1 653 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 TMEM30AQ9NV96 361 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 TJP2Q9UDY2 1190 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 YBX2Q9Y2T7 364 aaKnown RBP13.75□□□□□ -0.21
CPNE3-205ENST00000522240 CAPN6Q9Y6Q1 641 aa13.75□□□□□ -0.21
CPNE3-205ENST00000522240 COL4A4P53420 1690 aaPredicted RBP13.75□□□□□ -0.21
CPNE3-205ENST00000522240 FAM170AA1A519 330 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 C2CD2LO14523 706 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 ADAM12O43184 909 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 PAPSS1O43252 624 aaPredicted RBP13.74□□□□□ -0.21
CPNE3-205ENST00000522240 SART1O43290 800 aaKnown RBP13.74□□□□□ -0.21
CPNE3-205ENST00000522240 BUB1O43683 1085 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 ABLIM3O94929 683 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 MOCS3O95396 460 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 MYOGP15173 224 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 OR1D2P34982 312 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 NOP2P46087 812 aaKnown RBP13.74□□□□□ -0.21
CPNE3-205ENST00000522240 MAMLD1Q13495 774 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 SMC1AQ14683 1233 aaKnown RBP13.74□□□□□ -0.21
CPNE3-205ENST00000522240 C2CD6Q53TS8 623 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 OLFML1Q6UWY5 402 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 RNF19BQ6ZMZ0 732 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 FAM183BPQ6ZVS7 135 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 SLC26A9Q7LBE3 791 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 SIX6OS1Q8N1H7 587 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 SPPL3Q8TCT6 385 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 UBE2Q2Q8WVN8 375 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 SELENOOQ9BVL4 669 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 PBX4Q9BYU1 374 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 RHOBTB2Q9BYZ6 727 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 OSGEPQ9NPF4 335 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 CNGB3Q9NQW8 809 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 TLR9Q9NR96 1032 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 ASNSD1Q9NWL6 643 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 MSRAQ9UJ68 235 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 COG5Q9UP83 839 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 PAXBP1Q9Y5B6 917 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 VCANP13611 3396 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 PLXNA3P51805 1871 aa13.74□□□□□ -0.21
CPNE3-205ENST00000522240 GRID2IPA4D2P6 1211 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 SIGLEC16A6NMB1 481 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 F8VP50 259 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 FSCN2O14926 492 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 VNN2O95498 520 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 HAPLN1P10915 354 aaPredicted RBP13.73□□□□□ -0.21
CPNE3-205ENST00000522240 RPL17P18621 184 aaKnown RBP13.73□□□□□ -0.21
CPNE3-205ENST00000522240 CYP2F1P24903 491 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 DNAJB2P25686 324 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 NAP1L1P55209 391 aaKnown RBP13.73□□□□□ -0.21
CPNE3-205ENST00000522240 ARPP19P56211 112 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 GNG11P61952 73 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 RPL10AP62906 217 aaKnown RBP13.73□□□□□ -0.21
CPNE3-205ENST00000522240 ADIGQ0VDE8 80 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 ZNF569Q5MCW4 686 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 FAM102AQ5T9C2 384 aaPredicted RBP13.73□□□□□ -0.21
CPNE3-205ENST00000522240 OR6B2Q6IFH4 312 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 PDE12Q6L8Q7 609 aaKnown RBP13.73□□□□□ -0.21
CPNE3-205ENST00000522240 ARCQ7LC44 396 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms