RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 BTBD1Q9H0C5 482 aa3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 VPS11Q9H270 941 aa3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 SMOC2Q9H3U7 446 aa3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 CHMP4BQ9H444 224 aaKnown RBP3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 DCTPP1Q9H773 170 aa3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 CERS4Q9HA82 394 aa3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 PPCSQ9HAB8 311 aa3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 PARD6AQ9NPB6 346 aa3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 PLCB1Q9NQ66 1216 aa3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 GNL3LQ9NVN8 582 aaKnown RBP3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 CFAP97Q9P2B7 532 aa3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 HSFX1Q9UBD0 423 aa3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 AFF4Q9UHB7 1163 aaKnown RBP3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 ZDHHC8Q9ULC8 765 aa3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 ZBTB1Q9Y2K1 713 aa3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 MED16Q9Y2X0 877 aa3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 SLC30A1Q9Y6M5 507 aa3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 MRC1P22897 1456 aa3.16□□□□□ -1.9
CKS1BP7-201ENST00000522230 SIPA1L3O60292 1781 aaPredicted RBP3.15□□□□□ -1.9
CKS1BP7-201ENST00000522230 KCPQ6ZWJ8 1503 aa3.15□□□□□ -1.9
CKS1BP7-201ENST00000522230 KLRG2A4D1S0 409 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 TRIM43BA6NCK2 446 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 ISM1B1AKI9 464 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 ERVV-2B6SEH9 535 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 NBNO60934 754 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 MFAP3LO75121 409 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 IPO13O94829 963 aaKnown RBP3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 HOXB7P09629 217 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 SETSIPP0DME0 302 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 CRKLP46109 303 aaKnown RBP3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 TOB1P50616 345 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 MAPK10P53779 464 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 HSD11B2P80365 405 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 HTRA4P83105 476 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 MC2RQ01718 297 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 GCKRQ14397 625 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 HABP2Q14520 560 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 PDCD4Q53EL6 469 aaKnown RBP3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 HSP90AB3PQ58FF7 597 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 FAM83BQ5T0W9 1011 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 GORABQ5T7V8 394 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 ERAP2Q6P179 960 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 ZNF585AQ6P3V2 769 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 GLB1LQ6UWU2 654 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 KIF6Q6ZMV9 814 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 UNC13DQ70J99 1090 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 POLNQ7Z5Q5 900 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 C11orf96Q7Z7L8 435 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 UNC5CLQ8IV45 518 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 RPAP2Q8IXW5 612 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 ACRBPQ8NEB7 543 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 NLGN4YQ8NFZ3 816 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 LINS1Q8NG48 757 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 DEPTORQ8TB45 409 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 Q8TCH9 128 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 SCAMP4Q969E2 229 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 TRIM43Q96BQ3 446 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 MIEF2Q96C03 454 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 GCC1Q96CN9 775 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 EDC3Q96F86 508 aaKnown RBP3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 FAM89AQ96GI7 184 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 KAZALD1Q96I82 304 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 MNTQ99583 582 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 BDH2Q9BUT1 245 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 GPR87Q9BY21 358 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 PUS3Q9BZE2 481 aaKnown RBP3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 DPH1Q9BZG8 443 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 LRRCC1Q9C099 1032 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 MS4A7Q9GZW8 240 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 GPR35Q9HC97 309 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 PNPLA8Q9NP80 782 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 TBC1D23Q9NUY8 699 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 BABAM1Q9NWV8 329 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 ETAA1Q9NY74 926 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 SRP68Q9UHB9 627 aaKnown RBP3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 ST6GALNAC2Q9UJ37 374 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 ITGB1BP2Q9UKP3 347 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 USP15Q9Y4E8 981 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 DISP2A7MBM2 1401 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 TNS2Q63HR2 1409 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 DOT1LQ8TEK3 1739 aa3.15□□□□□ -1.91
CKS1BP7-201ENST00000522230 PALLDQ8WX93 1383 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 JCADQ9P266 1359 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 IBTKQ9P2D0 1353 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 NRAPQ86VF7 1730 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 GLI3P10071 1580 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 APOL1O14791 398 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 DCLK1O15075 740 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 FAM20BO75063 409 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 ZNF623O75123 536 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 ZFPL1O95159 310 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 IL18RAPO95256 599 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 MT-ND5P03915 603 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 ELANEP08246 267 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 PIM1P11309 404 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 CYP19A1P11511 503 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 CKBP12277 381 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 MX1P20591 662 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms